Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5076

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
6,018,982	-		Psyr_5075	0.35	+0.6
6,019,002	+		Psyr_5075	0.37	-2.1
6,019,002	+		Psyr_5075	0.37	+0.5
6,019,003	-		Psyr_5075	0.37	-1.6
6,019,216	+		Psyr_5075	0.55	-2.8
6,019,216	+		Psyr_5075	0.55	+0.4
6,019,475	+		Psyr_5075	0.76	+1.6
6,019,475	+		Psyr_5075	0.76	+0.1
6,019,475	+		Psyr_5075	0.76	-1.2
6,019,475	+		Psyr_5075	0.76	+1.7
6,019,476	-		Psyr_5075	0.76	-0.7
6,019,476	-		Psyr_5075	0.76	+3.3
6,019,476	-		Psyr_5075	0.76	-1.7
6,019,480	-		Psyr_5075	0.77	+0.0
6,019,480	-		Psyr_5075	0.77	+0.4
6,019,480	-		Psyr_5075	0.77	+0.3
6,019,692	+				-1.8
6,019,692	+				-1.2
6,019,692	+				+1.6
6,019,692	+				-0.9
6,019,692	+				+1.0
6,019,693	-				-3.4
6,019,693	-				-0.8
6,019,693	-				-0.5
6,019,693	-				+0.1
6,019,693	-				-0.6
6,019,693	-				+0.1
6,019,693	-				+1.3
6,019,693	-				+0.8
6,019,693	-				-2.8
6,019,693	-				-1.0
6,019,749	-				-1.6
6,019,749	-				+0.0
6,019,838	+				-2.0
6,019,838	+				-0.6
6,019,838	+				-0.6
6,019,838	+				+2.2
6,019,839	-				-3.3
6,019,875	+				+0.1
6,019,875	+				-0.7
6,019,875	+				+0.1
6,019,875	+				+0.5
6,019,875	+				+0.6
6,019,875	+				+0.8
6,019,875	+				+1.0
6,019,875	+				+0.8
6,019,875	+				+1.0
6,019,875	+				-0.8
6,019,875	+				-0.2
6,019,876	-				-2.9
6,019,876	-				-1.0
6,019,876	-				+0.5
6,019,876	-				-1.3
6,019,876	-				-1.9
6,019,879	+				+1.5
6,019,879	+				-1.0
6,019,879	+				-0.3
6,019,879	+				-0.0
6,019,879	+				-0.5
6,019,879	+				+2.0
6,019,879	+				+0.1
6,019,880	-				-0.2
6,019,880	-				+1.1
6,019,996	-		Psyr_5076	0.24	-0.6
6,020,040	+		Psyr_5076	0.36	-0.1
6,020,040	+		Psyr_5076	0.36	+1.4
6,020,040	+		Psyr_5076	0.36	+1.3
6,020,040	+		Psyr_5076	0.36	+1.3
6,020,041	-		Psyr_5076	0.36	+0.3
6,020,041	-		Psyr_5076	0.36	-2.3
6,020,044	+		Psyr_5076	0.37	-0.2
6,020,044	+		Psyr_5076	0.37	+0.7
6,020,044	+		Psyr_5076	0.37	+0.5
6,020,044	+		Psyr_5076	0.37	-0.2
6,020,044	+		Psyr_5076	0.37	+0.5
6,020,044	+		Psyr_5076	0.37	-1.0
6,020,044	+		Psyr_5076	0.37	+0.5
6,020,044	+		Psyr_5076	0.37	+0.0
6,020,044	+		Psyr_5076	0.37	+1.1
6,020,045	-		Psyr_5076	0.37	+2.0
6,020,045	-		Psyr_5076	0.37	-0.1
6,020,045	-		Psyr_5076	0.37	-1.0
6,020,045	-		Psyr_5076	0.37	-2.6
6,020,045	-		Psyr_5076	0.37	+0.6
6,020,045	-		Psyr_5076	0.37	-2.0
6,020,045	-		Psyr_5076	0.37	+0.8
6,020,045	-		Psyr_5076	0.37	+2.1
6,020,045	-		Psyr_5076	0.37	-2.4
6,020,045	-		Psyr_5076	0.37	-0.5
6,020,045	-		Psyr_5076	0.37	+0.5
6,020,045	-		Psyr_5076	0.37	-0.9
6,020,045	-		Psyr_5076	0.37	+0.3
6,020,045	-		Psyr_5076	0.37	+0.5
6,020,045	-		Psyr_5076	0.37	-0.0
6,020,093	+		Psyr_5076	0.49	+0.7
6,020,094	-		Psyr_5076	0.50	+0.5
6,020,365	+				-1.6
6,020,366	-				+1.5
6,020,892	+		Psyr_5077	0.49	+0.8
6,020,892	+		Psyr_5077	0.49	-0.4
6,020,892	+		Psyr_5077	0.49	+0.2
6,020,892	+		Psyr_5077	0.49	-1.6
6,020,892	+		Psyr_5077	0.49	-0.4
6,020,892	+		Psyr_5077	0.49	-0.1
6,020,892	+		Psyr_5077	0.49	+0.1
6,020,892	+		Psyr_5077	0.49	+0.6
6,020,892	+		Psyr_5077	0.49	+0.6
6,020,892	+		Psyr_5077	0.49	-0.0
6,020,893	-		Psyr_5077	0.49	-2.2
6,020,893	-		Psyr_5077	0.49	+0.7
6,020,893	-		Psyr_5077	0.49	+1.3
6,021,189	+		Psyr_5077	0.73	+0.2
6,021,190	-		Psyr_5077	0.73	+0.6
6,021,190	-		Psyr_5077	0.73	+0.9
6,021,190	-		Psyr_5077	0.73	-1.7
6,021,239	-		Psyr_5077	0.77	-0.3
6,021,261	+		Psyr_5077	0.79	-0.1