Experiment: KB with Ferulic Acid 180 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4950 and Psyr_4951 overlap by 4 nucleotides Psyr_4951 and Psyr_4952 are separated by 383 nucleotides
Psyr_4950: Psyr_4950 - Peptidase M48, Ste24p, at 5,867,626 to 5,869,797
_4950
Psyr_4951: Psyr_4951 - hypothetical protein, at 5,869,794 to 5,870,114
_4951
Psyr_4952: Psyr_4952 - hypothetical protein, at 5,870,498 to 5,871,247
_4952
Position (kb) 5869
5870
5871 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5868.830 kb on + strand, within Psyr_4950 at 5868.831 kb on - strand, within Psyr_4950 at 5868.831 kb on - strand, within Psyr_4950 at 5868.854 kb on + strand, within Psyr_4950 at 5868.854 kb on + strand, within Psyr_4950 at 5868.855 kb on - strand, within Psyr_4950 at 5868.936 kb on - strand, within Psyr_4950 at 5868.936 kb on - strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.013 kb on + strand, within Psyr_4950 at 5869.014 kb on - strand, within Psyr_4950 at 5869.014 kb on - strand, within Psyr_4950 at 5869.014 kb on - strand, within Psyr_4950 at 5869.088 kb on + strand, within Psyr_4950 at 5869.088 kb on + strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.089 kb on - strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.161 kb on + strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.162 kb on - strand, within Psyr_4950 at 5869.205 kb on + strand, within Psyr_4950 at 5869.519 kb on - strand, within Psyr_4950 at 5869.655 kb on + strand at 5869.655 kb on + strand at 5869.771 kb on + strand at 5869.771 kb on + strand at 5869.772 kb on - strand at 5869.772 kb on - strand at 5869.787 kb on + strand at 5869.787 kb on + strand at 5869.811 kb on + strand at 5869.811 kb on + strand at 5869.811 kb on + strand at 5869.935 kb on - strand, within Psyr_4951 at 5869.936 kb on + strand, within Psyr_4951 at 5869.936 kb on + strand, within Psyr_4951 at 5869.936 kb on + strand, within Psyr_4951 at 5869.958 kb on + strand, within Psyr_4951 at 5869.958 kb on + strand, within Psyr_4951 at 5869.959 kb on - strand, within Psyr_4951 at 5869.959 kb on - strand, within Psyr_4951 at 5869.959 kb on - strand, within Psyr_4951 at 5870.071 kb on + strand, within Psyr_4951 at 5870.071 kb on + strand, within Psyr_4951 at 5870.071 kb on + strand, within Psyr_4951 at 5870.071 kb on + strand, within Psyr_4951 at 5870.072 kb on - strand, within Psyr_4951 at 5870.072 kb on - strand, within Psyr_4951 at 5870.076 kb on - strand, within Psyr_4951 at 5870.076 kb on - strand, within Psyr_4951 at 5870.076 kb on - strand, within Psyr_4951 at 5870.076 kb on - strand, within Psyr_4951 at 5870.106 kb on + strand at 5870.107 kb on - strand at 5870.107 kb on - strand at 5870.120 kb on + strand at 5870.126 kb on + strand at 5870.154 kb on - strand at 5870.154 kb on - strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.184 kb on + strand at 5870.185 kb on - strand at 5870.185 kb on - strand at 5870.185 kb on - strand at 5870.185 kb on - strand at 5870.190 kb on + strand at 5870.191 kb on - strand at 5870.191 kb on - strand at 5870.195 kb on + strand at 5870.196 kb on - strand at 5870.196 kb on - strand at 5870.267 kb on - strand at 5870.276 kb on - strand at 5870.304 kb on + strand at 5870.332 kb on + strand at 5870.332 kb on + strand at 5870.332 kb on + strand at 5870.332 kb on + strand at 5870.333 kb on - strand at 5870.333 kb on - strand at 5870.333 kb on - strand at 5870.333 kb on - strand at 5870.333 kb on - strand at 5870.333 kb on - strand at 5870.333 kb on - strand at 5870.335 kb on - strand at 5870.493 kb on + strand at 5870.493 kb on + strand at 5870.493 kb on + strand at 5870.493 kb on + strand at 5870.516 kb on - strand at 5870.517 kb on + strand at 5870.517 kb on + strand at 5870.517 kb on + strand at 5870.517 kb on + strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.518 kb on - strand at 5870.554 kb on + strand at 5870.588 kb on + strand, within Psyr_4952 at 5870.588 kb on + strand, within Psyr_4952 at 5870.588 kb on + strand, within Psyr_4952 at 5870.589 kb on - strand, within Psyr_4952 at 5870.589 kb on - strand, within Psyr_4952 at 5870.613 kb on + strand, within Psyr_4952 at 5870.640 kb on - strand, within Psyr_4952 at 5870.640 kb on - strand, within Psyr_4952 at 5870.708 kb on + strand, within Psyr_4952 at 5870.708 kb on + strand, within Psyr_4952 at 5870.709 kb on - strand, within Psyr_4952 at 5870.807 kb on + strand, within Psyr_4952 at 5870.807 kb on + strand, within Psyr_4952 at 5870.808 kb on - strand, within Psyr_4952 at 5870.808 kb on - strand, within Psyr_4952 at 5870.951 kb on + strand, within Psyr_4952 at 5870.951 kb on + strand, within Psyr_4952 at 5870.952 kb on - strand, within Psyr_4952 at 5870.952 kb on - strand, within Psyr_4952 at 5870.952 kb on - strand, within Psyr_4952 at 5870.952 kb on - strand, within Psyr_4952 at 5870.952 kb on - strand, within Psyr_4952 at 5870.952 kb on - strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.955 kb on + strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.956 kb on - strand, within Psyr_4952 at 5870.963 kb on + strand, within Psyr_4952 at 5870.963 kb on + strand, within Psyr_4952 at 5870.963 kb on + strand, within Psyr_4952 at 5870.964 kb on - strand, within Psyr_4952 at 5870.964 kb on - strand, within Psyr_4952 at 5870.964 kb on - strand, within Psyr_4952 at 5870.964 kb on - strand, within Psyr_4952 at 5870.964 kb on - strand, within Psyr_4952 at 5870.978 kb on + strand, within Psyr_4952 at 5870.978 kb on + strand, within Psyr_4952 at 5870.979 kb on - strand, within Psyr_4952 at 5870.979 kb on - strand, within Psyr_4952 at 5870.979 kb on - strand, within Psyr_4952 at 5870.979 kb on - strand, within Psyr_4952 at 5870.979 kb on - strand, within Psyr_4952
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Ferulic Acid 180 ug/ml remove 5,868,830 + Psyr_4950 0.55 -2.7 5,868,831 - Psyr_4950 0.55 +0.6 5,868,831 - Psyr_4950 0.55 -1.3 5,868,854 + Psyr_4950 0.57 +0.5 5,868,854 + Psyr_4950 0.57 +0.9 5,868,855 - Psyr_4950 0.57 +1.2 5,868,936 - Psyr_4950 0.60 -0.6 5,868,936 - Psyr_4950 0.60 +0.1 5,869,013 + Psyr_4950 0.64 -1.1 5,869,013 + Psyr_4950 0.64 +0.1 5,869,013 + Psyr_4950 0.64 -0.1 5,869,013 + Psyr_4950 0.64 +0.5 5,869,013 + Psyr_4950 0.64 -0.5 5,869,013 + Psyr_4950 0.64 -1.1 5,869,013 + Psyr_4950 0.64 -2.5 5,869,013 + Psyr_4950 0.64 +0.4 5,869,013 + Psyr_4950 0.64 -3.1 5,869,013 + Psyr_4950 0.64 -0.8 5,869,013 + Psyr_4950 0.64 -0.8 5,869,014 - Psyr_4950 0.64 +0.8 5,869,014 - Psyr_4950 0.64 -0.2 5,869,014 - Psyr_4950 0.64 -1.3 5,869,088 + Psyr_4950 0.67 +0.9 5,869,088 + Psyr_4950 0.67 +0.3 5,869,089 - Psyr_4950 0.67 -0.4 5,869,089 - Psyr_4950 0.67 +1.2 5,869,089 - Psyr_4950 0.67 -1.1 5,869,089 - Psyr_4950 0.67 +0.4 5,869,089 - Psyr_4950 0.67 +1.4 5,869,089 - Psyr_4950 0.67 +0.3 5,869,089 - Psyr_4950 0.67 +0.2 5,869,089 - Psyr_4950 0.67 -0.9 5,869,089 - Psyr_4950 0.67 +0.4 5,869,089 - Psyr_4950 0.67 +0.6 5,869,161 + Psyr_4950 0.71 -1.5 5,869,161 + Psyr_4950 0.71 -0.2 5,869,161 + Psyr_4950 0.71 -0.6 5,869,161 + Psyr_4950 0.71 +0.8 5,869,161 + Psyr_4950 0.71 -1.0 5,869,161 + Psyr_4950 0.71 -0.5 5,869,161 + Psyr_4950 0.71 +1.9 5,869,161 + Psyr_4950 0.71 +1.0 5,869,161 + Psyr_4950 0.71 -0.0 5,869,162 - Psyr_4950 0.71 -3.2 5,869,162 - Psyr_4950 0.71 +0.6 5,869,162 - Psyr_4950 0.71 -0.5 5,869,162 - Psyr_4950 0.71 -0.2 5,869,162 - Psyr_4950 0.71 -1.0 5,869,162 - Psyr_4950 0.71 -0.2 5,869,162 - Psyr_4950 0.71 -1.5 5,869,162 - Psyr_4950 0.71 -0.8 5,869,162 - Psyr_4950 0.71 +0.4 5,869,162 - Psyr_4950 0.71 +0.3 5,869,162 - Psyr_4950 0.71 -2.3 5,869,162 - Psyr_4950 0.71 -1.0 5,869,162 - Psyr_4950 0.71 +0.9 5,869,162 - Psyr_4950 0.71 -1.0 5,869,162 - Psyr_4950 0.71 +0.0 5,869,162 - Psyr_4950 0.71 +1.7 5,869,205 + Psyr_4950 0.73 -0.4 5,869,519 - Psyr_4950 0.87 -0.5 5,869,655 + +0.1 5,869,655 + +0.2 5,869,771 + -3.0 5,869,771 + -2.9 5,869,772 - -0.1 5,869,772 - -0.6 5,869,787 + +0.1 5,869,787 + -0.6 5,869,811 + -0.9 5,869,811 + +0.8 5,869,811 + +0.0 5,869,935 - Psyr_4951 0.44 +0.6 5,869,936 + Psyr_4951 0.44 +0.0 5,869,936 + Psyr_4951 0.44 +0.6 5,869,936 + Psyr_4951 0.44 +0.4 5,869,958 + Psyr_4951 0.51 +0.3 5,869,958 + Psyr_4951 0.51 +0.5 5,869,959 - Psyr_4951 0.51 +1.0 5,869,959 - Psyr_4951 0.51 +0.2 5,869,959 - Psyr_4951 0.51 +1.0 5,870,071 + Psyr_4951 0.86 -0.7 5,870,071 + Psyr_4951 0.86 +0.5 5,870,071 + Psyr_4951 0.86 +1.0 5,870,071 + Psyr_4951 0.86 +0.8 5,870,072 - Psyr_4951 0.87 -0.6 5,870,072 - Psyr_4951 0.87 -0.4 5,870,076 - Psyr_4951 0.88 -0.2 5,870,076 - Psyr_4951 0.88 +0.8 5,870,076 - Psyr_4951 0.88 +0.7 5,870,076 - Psyr_4951 0.88 +0.2 5,870,106 + -1.5 5,870,107 - -0.1 5,870,107 - -1.8 5,870,120 + -1.1 5,870,126 + +0.7 5,870,154 - -0.2 5,870,154 - +0.1 5,870,184 + +3.8 5,870,184 + -0.7 5,870,184 + +0.1 5,870,184 + +0.6 5,870,184 + +0.0 5,870,184 + -1.3 5,870,184 + +0.2 5,870,184 + -1.4 5,870,184 + -0.8 5,870,185 - +0.1 5,870,185 - -0.8 5,870,185 - -0.3 5,870,185 - -0.5 5,870,190 + -1.0 5,870,191 - -0.4 5,870,191 - +1.1 5,870,195 + +0.2 5,870,196 - -0.7 5,870,196 - -1.3 5,870,267 - -1.4 5,870,276 - -1.1 5,870,304 + +0.5 5,870,332 + -0.3 5,870,332 + +0.0 5,870,332 + +0.4 5,870,332 + -2.2 5,870,333 - +2.6 5,870,333 - +1.5 5,870,333 - +1.4 5,870,333 - -2.0 5,870,333 - -3.2 5,870,333 - +0.6 5,870,333 - -1.4 5,870,335 - -1.6 5,870,493 + -0.2 5,870,493 + -2.5 5,870,493 + +0.3 5,870,493 + -1.1 5,870,516 - +0.7 5,870,517 + -2.1 5,870,517 + -1.2 5,870,517 + +1.8 5,870,517 + +0.7 5,870,518 - +0.4 5,870,518 - -1.0 5,870,518 - -3.1 5,870,518 - +0.8 5,870,518 - +0.9 5,870,518 - +1.4 5,870,518 - -0.1 5,870,518 - -0.1 5,870,518 - +0.4 5,870,518 - +0.9 5,870,554 + +1.0 5,870,588 + Psyr_4952 0.12 +0.7 5,870,588 + Psyr_4952 0.12 -0.2 5,870,588 + Psyr_4952 0.12 +1.9 5,870,589 - Psyr_4952 0.12 +1.1 5,870,589 - Psyr_4952 0.12 +1.7 5,870,613 + Psyr_4952 0.15 +0.6 5,870,640 - Psyr_4952 0.19 +1.5 5,870,640 - Psyr_4952 0.19 +2.2 5,870,708 + Psyr_4952 0.28 -0.4 5,870,708 + Psyr_4952 0.28 +1.5 5,870,709 - Psyr_4952 0.28 +1.6 5,870,807 + Psyr_4952 0.41 -1.5 5,870,807 + Psyr_4952 0.41 +0.4 5,870,808 - Psyr_4952 0.41 +0.4 5,870,808 - Psyr_4952 0.41 +1.9 5,870,951 + Psyr_4952 0.60 +0.1 5,870,951 + Psyr_4952 0.60 -0.4 5,870,952 - Psyr_4952 0.61 -1.4 5,870,952 - Psyr_4952 0.61 +0.0 5,870,952 - Psyr_4952 0.61 +0.0 5,870,952 - Psyr_4952 0.61 +1.3 5,870,952 - Psyr_4952 0.61 -0.2 5,870,952 - Psyr_4952 0.61 +0.3 5,870,955 + Psyr_4952 0.61 -0.2 5,870,955 + Psyr_4952 0.61 -0.1 5,870,955 + Psyr_4952 0.61 -0.4 5,870,955 + Psyr_4952 0.61 +0.9 5,870,955 + Psyr_4952 0.61 -0.2 5,870,955 + Psyr_4952 0.61 -1.1 5,870,955 + Psyr_4952 0.61 -0.8 5,870,956 - Psyr_4952 0.61 +0.5 5,870,956 - Psyr_4952 0.61 -0.3 5,870,956 - Psyr_4952 0.61 +1.0 5,870,956 - Psyr_4952 0.61 +1.3 5,870,956 - Psyr_4952 0.61 -0.3 5,870,956 - Psyr_4952 0.61 +1.1 5,870,956 - Psyr_4952 0.61 +1.0 5,870,956 - Psyr_4952 0.61 +0.1 5,870,956 - Psyr_4952 0.61 +0.5 5,870,963 + Psyr_4952 0.62 -1.1 5,870,963 + Psyr_4952 0.62 -0.9 5,870,963 + Psyr_4952 0.62 +1.0 5,870,964 - Psyr_4952 0.62 +0.2 5,870,964 - Psyr_4952 0.62 +1.1 5,870,964 - Psyr_4952 0.62 +0.3 5,870,964 - Psyr_4952 0.62 -0.5 5,870,964 - Psyr_4952 0.62 +0.8 5,870,978 + Psyr_4952 0.64 +0.5 5,870,978 + Psyr_4952 0.64 +1.3 5,870,979 - Psyr_4952 0.64 +0.2 5,870,979 - Psyr_4952 0.64 -1.5 5,870,979 - Psyr_4952 0.64 -0.8 5,870,979 - Psyr_4952 0.64 +1.0 5,870,979 - Psyr_4952 0.64 +0.1
Or see this region's nucleotide sequence