Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4434

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
5,300,600	+				-2.3
5,300,600	+				-0.3
5,300,600	+				+0.4
5,300,600	+				-1.3
5,300,600	+				-1.5
5,300,600	+				-0.3
5,300,600	+				-0.5
5,300,600	+				-0.3
5,300,600	+				-0.1
5,300,600	+				+0.1
5,300,600	+				+2.8
5,300,600	+				-1.1
5,300,601	-				-0.5
5,300,601	-				-2.1
5,300,601	-				-2.5
5,300,601	-				-1.7
5,300,601	-				+0.9
5,300,601	-				-0.3
5,300,601	-				-1.3
5,300,601	-				-0.7
5,300,601	-				+0.1
5,300,601	-				+0.5
5,300,601	-				+1.1
5,300,601	-				-1.3
5,300,601	-				-0.0
5,300,601	-				-1.5
5,300,601	-				-0.6
5,300,602	+				-0.5
5,300,602	+				+0.6
5,300,602	+				+0.2
5,300,602	+				-1.2
5,300,602	+				-0.4
5,300,602	+				+0.3
5,300,602	+				-0.3
5,300,602	+				-0.5
5,300,602	+				-0.9
5,300,602	+				-0.1
5,300,602	+				-2.1
5,300,602	+				-2.1
5,300,602	+				+0.1
5,300,602	+				+0.5
5,300,602	+				-0.5
5,300,602	+				-1.1
5,300,602	+				+0.2
5,300,602	+				-1.9
5,300,602	+				+0.3
5,300,602	+				-0.4
5,300,602	+				-0.7
5,300,602	+				-1.6
5,300,602	+				-1.1
5,300,602	+				+1.1
5,300,602	+				-0.4
5,300,602	+				-0.0
5,300,602	+				+0.0
5,300,602	+				+0.6
5,300,603	-				+1.0
5,300,603	-				+0.3
5,300,603	-				+0.9
5,300,603	-				-0.0
5,300,603	-				+0.7
5,300,603	-				+0.2
5,300,603	-				+0.2
5,300,603	-				-0.9
5,300,603	-				+0.2
5,300,603	-				+0.9
5,300,603	-				+0.5
5,300,603	-				-0.3
5,300,603	-				+0.4
5,300,603	-				-0.0
5,300,603	-				-1.7
5,300,603	-				+0.0
5,300,603	-				+0.5
5,300,603	-				+0.7
5,300,603	-				+0.0
5,300,603	-				+0.3
5,300,603	-				-0.3
5,300,603	-				+0.4
5,300,603	-				-0.4
5,300,603	-				-2.3
5,300,603	-				-0.5
5,300,603	-				+0.8
5,300,603	-				+0.9
5,300,606	+				+0.3
5,300,606	+				-0.4
5,300,607	-				+0.9
5,300,607	-				+1.1
5,300,607	-				-0.3
5,300,778	+		Psyr_4432	0.37	+0.4
5,300,778	+		Psyr_4432	0.37	+0.5
5,300,778	+		Psyr_4432	0.37	+1.6
5,300,778	+		Psyr_4432	0.37	+0.4
5,300,778	+		Psyr_4432	0.37	-2.9
5,300,778	+		Psyr_4432	0.37	-3.4
5,300,778	+		Psyr_4432	0.37	-0.1
5,300,778	+		Psyr_4432	0.37	+1.4
5,300,778	+		Psyr_4432	0.37	+0.6
5,300,778	+		Psyr_4432	0.37	-0.6
5,300,778	+		Psyr_4432	0.37	+0.7
5,300,778	+		Psyr_4432	0.37	-3.8
5,300,779	-		Psyr_4432	0.37	+0.5
5,300,779	-		Psyr_4432	0.37	+1.4
5,300,779	-		Psyr_4432	0.37	+0.9
5,300,779	-		Psyr_4432	0.37	-1.4
5,300,779	-		Psyr_4432	0.37	-0.0
5,300,779	-		Psyr_4432	0.37	-0.4
5,300,779	-		Psyr_4432	0.37	+0.7
5,300,779	-		Psyr_4432	0.37	+0.1
5,300,883	-		Psyr_4432	0.71	-2.5
5,301,037	+		Psyr_4433	0.10	+0.9
5,301,037	+		Psyr_4433	0.10	-0.1
5,301,037	+		Psyr_4433	0.10	+0.3
5,301,037	+		Psyr_4433	0.10	+1.0
5,301,037	+		Psyr_4433	0.10	-1.9
5,301,037	+		Psyr_4433	0.10	+0.8
5,301,037	+		Psyr_4433	0.10	-0.3
5,301,038	-		Psyr_4433	0.10	-0.4
5,301,038	-		Psyr_4433	0.10	-0.1
5,301,038	-		Psyr_4433	0.10	+0.5
5,301,038	-		Psyr_4433	0.10	+0.2
5,301,038	-		Psyr_4433	0.10	+0.5
5,301,038	-		Psyr_4433	0.10	-3.3
5,301,038	-		Psyr_4433	0.10	+0.9
5,301,038	-		Psyr_4433	0.10	-2.5
5,301,038	-		Psyr_4433	0.10	+0.4
5,301,038	-		Psyr_4433	0.10	+0.0
5,301,038	-		Psyr_4433	0.10	+2.6
5,301,038	-		Psyr_4433	0.10	-0.2
5,301,038	-		Psyr_4433	0.10	+0.5
5,301,113	-		Psyr_4433	0.24	-0.8
5,301,225	+		Psyr_4433	0.44	-0.2
5,301,244	+		Psyr_4433	0.47	-1.1
5,301,244	+		Psyr_4433	0.47	-0.9
5,301,244	+		Psyr_4433	0.47	+1.4
5,301,244	+		Psyr_4433	0.47	+2.5
5,301,244	+		Psyr_4433	0.47	-2.7
5,301,244	+		Psyr_4433	0.47	+2.6
5,301,245	-		Psyr_4433	0.47	-0.1
5,301,245	-		Psyr_4433	0.47	-1.5
5,301,245	-		Psyr_4433	0.47	-1.7
5,301,245	-		Psyr_4433	0.47	-3.5
5,301,245	-		Psyr_4433	0.47	+1.8
5,301,245	-		Psyr_4433	0.47	-0.6
5,301,535	+				+0.8
5,301,686	+		Psyr_4434	0.26	+0.4
5,301,686	+		Psyr_4434	0.26	+1.7
5,301,687	-		Psyr_4434	0.26	+1.0
5,301,687	-		Psyr_4434	0.26	+0.9
5,301,969	-		Psyr_4434	0.79	+0.6
5,301,969	-		Psyr_4434	0.79	+0.1
5,301,969	-		Psyr_4434	0.79	-0.5
5,301,969	-		Psyr_4434	0.79	+0.4
5,301,983	+		Psyr_4434	0.81	+0.1
5,301,984	-		Psyr_4434	0.82	+0.5
5,301,984	-		Psyr_4434	0.82	+1.2
5,302,011	-		Psyr_4434	0.87	-0.1
5,302,053	-				+0.2
5,302,053	-				-0.7
5,302,381	+				+0.9
5,302,381	+				+0.5
5,302,381	+				+4.2
5,302,382	-				-0.7
5,302,382	-				+0.9
5,302,428	+				+0.6
5,302,429	-				-0.4
5,302,429	-				-0.5
5,302,429	-				-0.6
5,302,429	-				-0.6
5,302,429	-				-1.1
5,302,429	-				+0.6
5,302,476	+				+0.5
5,302,476	+				+0.4
5,302,476	+				+0.1
5,302,476	+				-1.9
5,302,476	+				-0.4
5,302,476	+				+1.8
5,302,476	+				+0.6
5,302,476	+				+1.4
5,302,476	+				+1.5
5,302,476	+				-0.0
5,302,476	+				-0.8
5,302,476	+				-0.2
5,302,476	+				+1.1
5,302,477	-				+0.9
5,302,477	-				-0.7
5,302,477	-				+0.4
5,302,516	+				+1.2
5,302,531	+				-1.9
5,302,532	-				-0.9
5,302,532	-				+0.2
5,302,532	-				+0.0
5,302,545	+				-1.6
5,302,546	-				+0.2
5,302,635	+				-0.5
5,302,636	-				+0.9
5,302,636	-				-0.6
5,302,636	-				+1.1
5,302,797	-		Psyr_4436	0.16	+1.1