Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3310

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
3,960,938	-		Psyr_3309	0.38	+2.1
3,960,991	+		Psyr_3309	0.41	+0.7
3,961,318	+		Psyr_3309	0.64	-0.4
3,961,319	-		Psyr_3309	0.64	+0.6
3,961,394	-		Psyr_3309	0.70	+0.5
3,961,394	-		Psyr_3309	0.70	-0.5
3,961,468	+		Psyr_3309	0.75	-3.1
3,961,469	-		Psyr_3309	0.75	-1.8
3,961,470	+		Psyr_3309	0.75	-1.5
3,961,471	-		Psyr_3309	0.75	+1.1
3,961,505	-		Psyr_3309	0.78	-0.2
3,961,505	-		Psyr_3309	0.78	+0.2
3,961,505	-		Psyr_3309	0.78	-1.0
3,961,505	-		Psyr_3309	0.78	+1.0
3,961,505	-		Psyr_3309	0.78	-1.7
3,961,510	+		Psyr_3309	0.78	+0.9
3,961,511	-		Psyr_3309	0.78	-1.8
3,961,511	-		Psyr_3309	0.78	+0.8
3,961,511	-		Psyr_3309	0.78	-0.5
3,961,511	-		Psyr_3309	0.78	-0.7
3,961,632	+		Psyr_3309	0.87	-0.2
3,961,632	+		Psyr_3309	0.87	+0.8
3,961,633	-		Psyr_3309	0.87	-1.9
3,961,678	+		Psyr_3309	0.90	-0.6
3,961,678	+		Psyr_3309	0.90	+1.4
3,961,678	+		Psyr_3309	0.90	-1.8
3,961,679	-		Psyr_3309	0.90	+0.7
3,961,679	-		Psyr_3309	0.90	+2.0
3,961,679	-		Psyr_3309	0.90	+1.9
3,961,844	+				+0.3
3,961,844	+				+2.3
3,961,845	-				+0.5
3,961,955	+		Psyr_3310	0.17	+0.5
3,961,955	+		Psyr_3310	0.17	+1.9
3,961,955	+		Psyr_3310	0.17	+1.6
3,961,956	-		Psyr_3310	0.17	+1.2
3,961,956	-		Psyr_3310	0.17	-0.2
3,961,956	-		Psyr_3310	0.17	-0.3
3,961,986	+		Psyr_3310	0.20	-1.0
3,962,034	+		Psyr_3310	0.26	+1.2
3,962,034	+		Psyr_3310	0.26	-1.3
3,962,034	+		Psyr_3310	0.26	+0.3
3,962,034	+		Psyr_3310	0.26	+0.8
3,962,034	+		Psyr_3310	0.26	-0.9
3,962,035	-		Psyr_3310	0.26	-0.7
3,962,035	-		Psyr_3310	0.26	+0.5
3,962,136	+		Psyr_3310	0.39	+1.7
3,962,136	+		Psyr_3310	0.39	+0.3
3,962,136	+		Psyr_3310	0.39	+1.1
3,962,136	+		Psyr_3310	0.39	+0.5
3,962,137	-		Psyr_3310	0.39	+1.9
3,962,137	-		Psyr_3310	0.39	-2.9
3,962,137	-		Psyr_3310	0.39	+1.9
3,962,598	+				+2.9
3,962,598	+				+1.0
3,962,598	+				-0.7
3,962,599	-				-1.2
3,962,599	-				+1.0
3,962,599	-				-1.5
3,962,599	-				-1.6
3,963,150	+		Psyr_3311	0.35	-1.1
3,963,151	-		Psyr_3311	0.35	-0.1
3,963,151	-		Psyr_3311	0.35	+1.1
3,963,151	-		Psyr_3311	0.35	-0.3
3,963,151	-		Psyr_3311	0.35	+1.5
3,963,233	-		Psyr_3311	0.41	-1.6
3,963,233	-		Psyr_3311	0.41	-1.8
3,963,233	-		Psyr_3311	0.41	+0.9
3,963,375	-		Psyr_3311	0.51	+3.3