Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3062

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
3,660,580	+				+1.3
3,660,642	+				-1.1
3,660,653	-				-0.9
3,660,674	+				+0.0
3,660,689	+				-1.1
3,660,692	-				+1.6
3,660,733	+				+0.7
3,660,853	+				+1.2
3,660,853	+				+0.5
3,660,890	-		Psyr_3061	0.12	+1.0
3,661,457	+				-1.0
3,661,457	+				-3.1
3,661,457	+				+0.7
3,661,457	+				+0.3
3,661,458	-				-0.2
3,661,458	-				+1.2
3,661,458	-				-0.5
3,661,458	-				+0.4
3,661,458	-				+0.2
3,661,458	-				-0.1
3,661,458	-				-2.6
3,661,458	-				-0.5
3,661,458	-				+1.1
3,661,458	-				-1.7
3,661,458	-				-1.5
3,661,461	+				-0.5
3,661,461	+				+0.5
3,661,462	-				+1.6
3,661,462	-				+0.6
3,661,508	-				-0.5
3,661,622	+		Psyr_3062	0.13	-1.5
3,661,623	-		Psyr_3062	0.13	-1.6
3,661,623	-		Psyr_3062	0.13	+0.3
3,661,740	+		Psyr_3062	0.26	-0.7
3,661,740	+		Psyr_3062	0.26	-1.2
3,661,740	+		Psyr_3062	0.26	-0.2
3,661,741	-		Psyr_3062	0.26	-1.8
3,661,741	-		Psyr_3062	0.26	-1.0
3,661,760	-		Psyr_3062	0.29	+2.0
3,661,877	-		Psyr_3062	0.42	-2.1
3,661,896	-		Psyr_3062	0.44	-0.6
3,662,058	+		Psyr_3062	0.62	-0.2
3,662,059	-		Psyr_3062	0.62	-0.1
3,662,059	-		Psyr_3062	0.62	-0.6
3,662,292	+		Psyr_3062	0.88	-3.4
3,662,292	+		Psyr_3062	0.88	-0.2
3,662,293	-		Psyr_3062	0.88	-0.4
3,662,293	-		Psyr_3062	0.88	-3.0
3,662,343	+				-0.2
3,662,431	+				+0.7
3,662,431	+				-0.5
3,662,431	+				+1.5
3,662,432	-				-0.4
3,662,433	+				-2.1
3,662,433	+				-2.3
3,662,433	+				-2.4
3,662,433	+				+0.7
3,662,434	-				-0.0
3,662,434	-				+0.5
3,662,434	-				+1.6
3,662,434	-				+1.4
3,662,434	-				+2.1
3,662,446	+				+0.5
3,662,446	+				-1.5
3,662,446	+				-1.5
3,662,446	+				+0.3
3,662,446	+				+0.1
3,662,446	+				+0.1
3,662,446	+				-0.7
3,662,447	-				+0.8
3,662,447	-				+0.1
3,662,678	-				+0.4
3,662,678	-				+0.3
3,662,739	+		Psyr_3063	0.11	-0.5
3,662,740	-		Psyr_3063	0.12	+1.6
3,662,751	+		Psyr_3063	0.12	+0.5
3,662,789	+				+0.5
3,662,793	+		Psyr_3063	0.15	+0.0
3,662,793	+		Psyr_3063	0.15	+0.5
3,662,793	+		Psyr_3063	0.15	+1.6
3,662,794	-		Psyr_3063	0.15	-0.7
3,662,794	-		Psyr_3063	0.15	+0.5
3,662,794	-		Psyr_3063	0.15	-1.9
3,662,794	-		Psyr_3063	0.15	+1.0
3,663,013	+		Psyr_3063	0.29	+0.5
3,663,013	+		Psyr_3063	0.29	-0.1
3,663,014	-		Psyr_3063	0.29	-2.5
3,663,014	-		Psyr_3063	0.29	-1.5
3,663,014	-		Psyr_3063	0.29	+0.4
3,663,014	-		Psyr_3063	0.29	-0.9
3,663,014	-		Psyr_3063	0.29	-0.3
3,663,014	-		Psyr_3063	0.29	-3.7
3,663,164	+		Psyr_3063	0.39	-0.7
3,663,216	+		Psyr_3063	0.42	+0.5
3,663,216	+		Psyr_3063	0.42	-0.3
3,663,216	+		Psyr_3063	0.42	-2.5
3,663,216	+		Psyr_3063	0.42	-1.3
3,663,216	+		Psyr_3063	0.42	-1.1
3,663,216	+		Psyr_3063	0.42	+0.5
3,663,217	-		Psyr_3063	0.42	+2.0
3,663,217	-		Psyr_3063	0.42	+1.7
3,663,217	-		Psyr_3063	0.42	+1.1
3,663,217	-		Psyr_3063	0.42	-0.2