Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2934

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
3,521,365	-				+0.1
3,521,371	+				-1.3
3,521,373	+				-0.3
3,521,373	+				+0.6
3,521,373	+				+0.8
3,521,374	-				-1.9
3,521,374	-				+0.6
3,521,374	-				-0.1
3,521,374	-				+0.1
3,521,374	-				-0.4
3,521,374	-				+0.0
3,521,374	-				-0.1
3,521,374	-				+1.2
3,521,374	-				-3.4
3,521,374	-				+0.9
3,521,420	-				-0.4
3,521,458	-				-1.9
3,521,558	+		Psyr_2933	0.17	+0.7
3,521,590	+		Psyr_2933	0.23	+0.5
3,521,590	+		Psyr_2933	0.23	-0.1
3,521,590	+		Psyr_2933	0.23	-1.1
3,521,590	+		Psyr_2933	0.23	-0.9
3,521,590	+		Psyr_2933	0.23	-0.1
3,522,092	-				+1.0
3,522,092	-				+0.3
3,522,111	+				-3.0
3,522,117	+				+0.7
3,522,168	+				+1.6
3,522,238	+		Psyr_2934	0.13	+0.7
3,522,238	+		Psyr_2934	0.13	+0.1
3,522,238	+		Psyr_2934	0.13	+1.1
3,522,238	+		Psyr_2934	0.13	+0.7
3,522,239	-		Psyr_2934	0.13	-0.2
3,522,239	-		Psyr_2934	0.13	-0.4
3,522,239	-		Psyr_2934	0.13	+0.8
3,522,239	-		Psyr_2934	0.13	-2.1
3,522,239	-		Psyr_2934	0.13	-2.1
3,522,239	-		Psyr_2934	0.13	+0.3
3,522,310	+		Psyr_2934	0.19	+0.0
3,522,311	-		Psyr_2934	0.19	-1.8
3,522,411	-		Psyr_2934	0.28	+1.0
3,522,498	+		Psyr_2934	0.36	-1.9
3,522,499	-		Psyr_2934	0.36	-0.5
3,522,502	+		Psyr_2934	0.37	+1.5
3,522,522	-		Psyr_2934	0.38	+1.0
3,522,580	+		Psyr_2934	0.44	+1.4
3,522,581	-		Psyr_2934	0.44	+0.4
3,522,581	-		Psyr_2934	0.44	+0.5
3,522,581	-		Psyr_2934	0.44	+0.3
3,522,581	-		Psyr_2934	0.44	-0.3
3,522,581	-		Psyr_2934	0.44	+0.5
3,522,763	-		Psyr_2934	0.60	+1.7
3,522,822	+		Psyr_2934	0.66	+0.7
3,522,895	+		Psyr_2934	0.72	+1.7
3,523,000	-		Psyr_2934	0.82	+0.1
3,523,006	+		Psyr_2934	0.82	+0.0
3,523,007	-		Psyr_2934	0.82	-3.3
3,523,007	-		Psyr_2934	0.82	+0.7
3,523,007	-		Psyr_2934	0.82	+1.3
3,523,079	+		Psyr_2934	0.89	+1.5
3,523,080	-		Psyr_2934	0.89	+0.5
3,523,150	+				+2.0
3,523,171	+				-1.6
3,523,171	+				+0.4
3,523,171	+				+1.0
3,523,172	-				-0.3
3,523,172	-				-0.6
3,523,172	-				-0.5
3,523,172	-				+0.2
3,523,195	+				+2.1
3,523,195	+				+0.7
3,523,195	+				+1.1
3,523,195	+				-2.3
3,523,195	+				+1.2
3,523,195	+				+1.5
3,523,196	-				+2.8
3,523,196	-				-0.0
3,523,198	+				+0.1
3,523,199	-				+0.0
3,523,199	-				+0.6
3,523,249	-				+0.0
3,523,279	+				-0.7
3,523,279	+				+1.8
3,523,360	-				+0.1
3,523,395	+				-1.1
3,523,395	+				+0.1
3,523,396	-				-1.6
3,523,396	-				+0.8
3,523,440	+				+1.0
3,523,441	-				+1.7
3,523,441	-				-1.4
3,523,470	+		Psyr_2935	0.17	-2.5
3,523,470	+		Psyr_2935	0.17	+0.1
3,523,470	+		Psyr_2935	0.17	-1.2
3,523,470	+		Psyr_2935	0.17	+1.8
3,523,471	-		Psyr_2935	0.17	-0.7
3,523,471	-		Psyr_2935	0.17	+1.4
3,523,471	-		Psyr_2935	0.17	-0.3
3,523,474	+		Psyr_2935	0.18	+0.7
3,523,474	+		Psyr_2935	0.18	+0.6
3,523,474	+		Psyr_2935	0.18	+1.1
3,523,474	+		Psyr_2935	0.18	-0.6
3,523,474	+		Psyr_2935	0.18	+0.2
3,523,474	+		Psyr_2935	0.18	+1.1
3,523,475	-		Psyr_2935	0.18	+0.1
3,523,475	-		Psyr_2935	0.18	+0.5
3,523,475	-		Psyr_2935	0.18	+0.4
3,523,475	-		Psyr_2935	0.18	-0.7
3,523,475	-		Psyr_2935	0.18	+0.2
3,523,475	-		Psyr_2935	0.18	-0.2
3,523,523	+		Psyr_2935	0.31	-0.2
3,523,539	+		Psyr_2935	0.35	+0.5
3,523,539	+		Psyr_2935	0.35	+0.9
3,523,539	+		Psyr_2935	0.35	+2.7
3,523,540	-		Psyr_2935	0.35	+0.2
3,523,540	-		Psyr_2935	0.35	-0.6
3,523,540	-		Psyr_2935	0.35	+0.4
3,523,540	-		Psyr_2935	0.35	+2.1
3,523,540	-		Psyr_2935	0.35	+2.7
3,523,588	-		Psyr_2935	0.48	-1.3
3,523,588	-		Psyr_2935	0.48	+0.5
3,523,610	+		Psyr_2935	0.53	-0.4
3,523,698	-		Psyr_2935	0.76	+0.6
3,523,698	-		Psyr_2935	0.76	+0.2
3,523,710	+		Psyr_2935	0.79	-0.9
3,523,711	-		Psyr_2935	0.79	-0.1
3,523,719	+		Psyr_2935	0.81	-1.0
3,523,720	-		Psyr_2935	0.82	-0.3
3,523,771	-				-1.5