Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2562

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
2,974,691	+		Psyr_2560	0.62	+1.8
2,974,692	-		Psyr_2560	0.62	-0.6
2,974,692	-		Psyr_2560	0.62	-0.6
2,974,692	-		Psyr_2560	0.62	-0.4
2,974,692	-		Psyr_2560	0.62	+0.7
2,974,695	+		Psyr_2560	0.62	+0.6
2,974,695	+		Psyr_2560	0.62	+1.2
2,974,696	-		Psyr_2560	0.62	+1.0
2,974,696	-		Psyr_2560	0.62	+0.4
2,974,696	-		Psyr_2560	0.62	-0.0
2,975,103	+				+0.8
2,975,104	-				+1.0
2,975,163	+		Psyr_2561	0.10	+1.3
2,975,188	+		Psyr_2561	0.14	+0.9
2,975,264	-		Psyr_2561	0.27	-1.4
2,975,264	-		Psyr_2561	0.27	-3.4
2,975,590	+		Psyr_2561	0.83	+0.5
2,975,591	-		Psyr_2561	0.83	-0.4
2,975,591	-		Psyr_2561	0.83	+1.0
2,975,591	-		Psyr_2561	0.83	+0.7
2,975,591	-		Psyr_2561	0.83	+0.4
2,975,594	+		Psyr_2561	0.83	-0.7
2,975,595	-		Psyr_2561	0.84	-1.1
2,975,973	-		Psyr_2562	0.18	-3.7
2,976,396	+		Psyr_2562	0.45	+1.1
2,976,397	-		Psyr_2562	0.45	-1.9
2,976,618	+		Psyr_2562	0.59	+3.2
2,976,619	-				-1.9
2,976,740	-		Psyr_2562	0.66	-2.4
2,976,740	-		Psyr_2562	0.66	-2.0
2,977,147	+				-0.3
2,977,147	+				+1.4
2,977,148	-				-1.7
2,977,148	-				+0.6
2,977,148	-				+1.1
2,977,148	-				+3.0
2,977,542	-		Psyr_2563	0.29	+0.7
2,977,641	+		Psyr_2563	0.41	+1.9
2,977,822	-		Psyr_2563	0.64	+0.9
2,977,979	-		Psyr_2563	0.84	+0.8
2,977,988	+		Psyr_2563	0.85	-0.9
2,977,989	-		Psyr_2563	0.85	+0.6
2,978,106	-				-1.4
2,978,106	-				-0.1
2,978,106	-				+0.2
2,978,106	-				-0.2
2,978,109	+				-0.1
2,978,109	+				-0.5
2,978,110	-				-1.9
2,978,197	-				+0.8