Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2529

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
2,939,428	+				+0.4
2,939,428	+				-2.4
2,939,428	+				+0.2
2,939,429	-				-0.0
2,939,429	-				+0.4
2,939,429	-				+1.2
2,939,595	-		Psyr_2528	0.19	-2.6
2,939,595	-		Psyr_2528	0.19	-1.9
2,939,595	-		Psyr_2528	0.19	-0.6
2,939,595	-		Psyr_2528	0.19	-0.1
2,939,595	-		Psyr_2528	0.19	+0.0
2,939,987	+		Psyr_2528	0.62	+0.4
2,939,987	+		Psyr_2528	0.62	-0.4
2,939,989	+		Psyr_2528	0.63	+0.3
2,939,990	-		Psyr_2528	0.63	+0.7
2,939,990	-		Psyr_2528	0.63	+0.7
2,940,209	+		Psyr_2528	0.87	+1.1
2,940,210	-		Psyr_2528	0.87	+1.0
2,940,596	+		Psyr_2529	0.20	+0.8
2,940,741	-		Psyr_2529	0.31	-3.0
2,940,758	+		Psyr_2529	0.33	+1.3
2,940,759	-		Psyr_2529	0.33	+2.4
2,940,908	+		Psyr_2529	0.45	-2.1
2,940,908	+		Psyr_2529	0.45	-0.4
2,940,908	+		Psyr_2529	0.45	+1.7
2,940,908	+		Psyr_2529	0.45	+1.7
2,940,908	+		Psyr_2529	0.45	-0.2
2,940,909	-		Psyr_2529	0.45	-0.6
2,940,909	-		Psyr_2529	0.45	-3.4
2,940,909	-		Psyr_2529	0.45	-0.3
2,941,287	+		Psyr_2529	0.75	+0.8
2,941,331	+		Psyr_2529	0.78	+0.7
2,941,331	+		Psyr_2529	0.78	-0.9
2,941,331	+		Psyr_2529	0.78	-1.7
2,941,332	-		Psyr_2529	0.78	+0.8
2,941,486	+				-0.1
2,941,486	+				-1.1
2,941,600	-				+0.3
2,941,609	+				+0.2
2,941,699	+				+0.7
2,941,792	+		Psyr_2530	0.14	+1.2
2,941,868	-		Psyr_2530	0.20	-1.7
2,942,131	+		Psyr_2530	0.40	-1.5
2,942,132	-		Psyr_2530	0.40	+0.8
2,942,146	+		Psyr_2530	0.41	+0.3
2,942,146	+		Psyr_2530	0.41	-1.5
2,942,147	-		Psyr_2530	0.42	+0.4
2,942,147	-		Psyr_2530	0.42	+1.0
2,942,147	-		Psyr_2530	0.42	+0.7
2,942,147	-		Psyr_2530	0.42	+3.4
2,942,254	+		Psyr_2530	0.50	+1.2
2,942,255	-		Psyr_2530	0.50	+0.7
2,942,255	-		Psyr_2530	0.50	+2.3
2,942,255	-		Psyr_2530	0.50	+0.0
2,942,255	-		Psyr_2530	0.50	-0.5
2,942,287	+		Psyr_2530	0.52	+0.2
2,942,287	+		Psyr_2530	0.52	+0.0
2,942,287	+		Psyr_2530	0.52	+0.6
2,942,443	+				+1.8
2,942,443	+		Psyr_2530	0.64	-0.3