Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2356

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
2,731,236	+		Psyr_2355	0.25	+0.3
2,731,236	+		Psyr_2355	0.25	+1.0
2,731,236	+		Psyr_2355	0.25	+0.8
2,731,236	+		Psyr_2355	0.25	-1.5
2,731,236	+		Psyr_2355	0.25	-1.9
2,731,237	-		Psyr_2355	0.25	+0.2
2,731,237	-		Psyr_2355	0.25	-1.1
2,731,258	-		Psyr_2355	0.29	-0.9
2,731,258	-		Psyr_2355	0.29	+0.3
2,731,258	-		Psyr_2355	0.29	+0.6
2,731,275	+		Psyr_2355	0.33	-2.5
2,731,276	-		Psyr_2355	0.33	+1.5
2,731,276	-		Psyr_2355	0.33	-3.6
2,731,276	-		Psyr_2355	0.33	+2.0
2,731,290	+		Psyr_2355	0.36	+1.2
2,731,440	+		Psyr_2355	0.65	-0.0
2,731,441	-		Psyr_2355	0.65	-0.7
2,731,472	-		Psyr_2355	0.72	-1.5
2,731,617	+				-1.1
2,731,617	+				-0.9
2,731,617	+				-2.4
2,731,617	+				+0.9
2,731,618	-				+1.5
2,731,618	-				+0.6
2,731,618	-				-2.4
2,731,618	-				+0.9
2,731,618	-				+1.0
2,731,618	-				+0.4
2,731,658	-				-0.1
2,731,658	-				-0.1
2,731,709	-				-1.3
2,731,709	-				+1.0
2,731,724	-				+0.7
2,731,775	+				-0.1
2,731,775	+				+0.2
2,731,775	+				+0.5
2,731,775	+				-0.4
2,731,775	+				+0.5
2,731,775	+				+0.1
2,731,776	-				+0.5
2,731,776	-				+0.0
2,731,776	-				-1.5
2,731,805	+				-0.1
2,731,805	+				+1.5
2,731,805	+				+2.0
2,731,805	+				+0.5
2,731,806	-				+0.5
2,731,806	-				-0.2
2,731,806	-				+0.5
2,731,806	-				-0.7
2,731,806	-				-1.9
2,732,047	+				-3.1
2,732,047	+				+1.7
2,732,047	+				+0.5
2,732,047	+				-1.2
2,732,048	-				-1.1
2,732,048	-				-0.0
2,732,048	-				-1.4
2,732,048	-				+0.5
2,732,048	-				+0.8
2,732,048	-				-2.0
2,732,110	+		Psyr_2356	0.12	-1.3
2,732,111	-		Psyr_2356	0.12	+0.5
2,732,145	-		Psyr_2356	0.14	+0.0
2,732,145	-		Psyr_2356	0.14	+1.3
2,732,187	+		Psyr_2356	0.16	-0.0
2,732,188	-		Psyr_2356	0.16	+0.6
2,732,389	+		Psyr_2356	0.27	+0.4
2,732,395	+		Psyr_2356	0.28	+0.0
2,732,746	-		Psyr_2356	0.46	-0.5
2,733,516	+		Psyr_2356	0.88	-0.1
2,733,896	+				+1.2
2,733,896	+				+3.2
2,733,896	+				+1.1
2,733,896	+				-0.5
2,733,896	+				-0.0
2,733,896	+				-0.5
2,733,896	+				+0.6
2,733,897	-				+0.0
2,733,897	-				+0.5
2,733,897	-				+1.1
2,733,897	-				+0.5
2,733,897	-				-1.1
2,733,897	-				-0.8
2,733,977	-		Psyr_2357	0.17	+0.5
2,733,977	-		Psyr_2357	0.17	+2.0
2,734,028	+		Psyr_2357	0.23	+1.5
2,734,067	-		Psyr_2357	0.27	-0.7
2,734,101	+		Psyr_2357	0.31	+0.5
2,734,101	+		Psyr_2357	0.31	-1.2
2,734,102	-		Psyr_2357	0.31	-0.3
2,734,164	+		Psyr_2357	0.38	-0.1
2,734,164	+		Psyr_2357	0.38	-2.4
2,734,164	+		Psyr_2357	0.38	-0.9
2,734,164	+		Psyr_2357	0.38	-1.1
2,734,165	-		Psyr_2357	0.38	+0.7
2,734,165	-		Psyr_2357	0.38	-0.7
2,734,165	-		Psyr_2357	0.38	+0.8
2,734,165	-		Psyr_2357	0.38	+0.6
2,734,165	-		Psyr_2357	0.38	-0.6
2,734,214	+		Psyr_2357	0.43	+2.5
2,734,215	-		Psyr_2357	0.43	-1.9
2,734,244	+		Psyr_2357	0.46	-0.9
2,734,245	-		Psyr_2357	0.47	+0.7
2,734,245	-		Psyr_2357	0.47	+1.5
2,734,351	+		Psyr_2357	0.58	+0.6
2,734,352	-		Psyr_2357	0.58	-0.0
2,734,452	+		Psyr_2357	0.69	-1.3
2,734,513	+		Psyr_2357	0.76	-1.3
2,734,513	+		Psyr_2357	0.76	-0.5
2,734,514	-		Psyr_2357	0.76	-1.9
2,734,514	-		Psyr_2357	0.76	-0.3
2,734,700	+				-2.1
2,734,700	+				-0.7
2,734,701	-				-1.6
2,734,701	-				+0.9