Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2204

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
2,559,762	+		Psyr_2203	0.18	-1.1
2,559,763	-		Psyr_2203	0.18	-0.0
2,560,026	+		Psyr_2203	0.41	-0.5
2,560,203	+		Psyr_2203	0.57	+1.5
2,560,209	+		Psyr_2203	0.57	-0.5
2,560,209	+		Psyr_2203	0.57	+0.4
2,560,404	+		Psyr_2203	0.74	-2.1
2,560,405	-		Psyr_2203	0.74	-0.2
2,560,405	-		Psyr_2203	0.74	+0.5
2,560,419	+		Psyr_2203	0.75	+3.3
2,560,419	+		Psyr_2203	0.75	-3.0
2,560,419	+		Psyr_2203	0.75	+0.3
2,560,420	-		Psyr_2203	0.76	-0.8
2,560,420	-		Psyr_2203	0.76	-3.2
2,560,519	-		Psyr_2203	0.84	-0.6
2,560,805	-		Psyr_2204	0.12	+1.3
2,561,311	+		Psyr_2204	0.68	-1.4
2,561,311	+		Psyr_2204	0.68	-0.5
2,561,312	-		Psyr_2204	0.68	-2.5
2,561,343	+		Psyr_2204	0.71	-0.5
2,561,395	+		Psyr_2204	0.77	-0.0
2,561,396	-		Psyr_2204	0.77	+0.8
2,561,446	+		Psyr_2204	0.83	+1.2
2,561,446	+		Psyr_2204	0.83	-0.2
2,561,446	+		Psyr_2204	0.83	-0.6
2,561,446	+		Psyr_2204	0.83	-0.2
2,561,447	-		Psyr_2204	0.83	+0.5
2,561,455	+		Psyr_2204	0.83	+1.7
2,561,455	+		Psyr_2204	0.83	+0.8
2,561,455	+		Psyr_2204	0.83	-1.2
2,561,455	+		Psyr_2204	0.83	+0.1
2,561,455	+		Psyr_2204	0.83	+0.9
2,561,455	+		Psyr_2204	0.83	+0.9
2,561,456	-		Psyr_2204	0.84	+1.7
2,561,456	-		Psyr_2204	0.84	+0.0
2,561,456	-		Psyr_2204	0.84	+0.5
2,561,456	-		Psyr_2204	0.84	-0.5
2,561,456	-		Psyr_2204	0.84	+2.1
2,561,456	-		Psyr_2204	0.84	+3.8
2,561,456	-		Psyr_2204	0.84	+0.2
2,561,584	-				+0.4
2,561,713	+				+0.7
2,561,713	+				-1.0
2,561,896	+		Psyr_2205	0.19	-0.1
2,561,896	+		Psyr_2205	0.19	-0.8
2,561,896	+		Psyr_2205	0.19	+1.4
2,561,897	-		Psyr_2205	0.19	-0.1
2,561,897	-		Psyr_2205	0.19	-0.6
2,561,908	+		Psyr_2205	0.20	+0.6
2,561,908	+		Psyr_2205	0.20	-2.3
2,561,909	-		Psyr_2205	0.20	+0.5
2,561,909	-		Psyr_2205	0.20	+1.0
2,561,909	-		Psyr_2205	0.20	+2.5
2,562,011	-		Psyr_2205	0.29	-0.6
2,562,011	-		Psyr_2205	0.29	+1.0
2,562,011	-		Psyr_2205	0.29	-0.0
2,562,136	+		Psyr_2205	0.39	+1.1
2,562,136	+		Psyr_2205	0.39	+1.0
2,562,144	+		Psyr_2205	0.40	+0.0
2,562,244	+		Psyr_2205	0.49	-0.3
2,562,322	+		Psyr_2205	0.55	+0.2
2,562,323	-		Psyr_2205	0.55	-0.2
2,562,340	+		Psyr_2205	0.57	+2.4
2,562,340	+		Psyr_2205	0.57	+0.1
2,562,420	-		Psyr_2205	0.63	-0.5
2,562,448	+		Psyr_2205	0.66	+0.6
2,562,449	-		Psyr_2205	0.66	-0.5
2,562,449	-		Psyr_2205	0.66	+1.0
2,562,449	-		Psyr_2205	0.66	+1.0
2,562,449	-		Psyr_2205	0.66	+2.4
2,562,463	+		Psyr_2205	0.67	+0.4
2,562,464	-		Psyr_2205	0.67	+0.5