Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2041

Experiment: KB with Ferulic Acid 180 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ferulic Acid 180 ug/ml
2,373,754	+		Psyr_2040	0.90	-1.6
2,373,754	+		Psyr_2040	0.90	-0.4
2,373,755	-				-1.5
2,373,755	-				+0.5
2,373,755	-				+1.9
2,373,755	-				+1.0
2,373,919	+				-3.3
2,373,919	+				+0.9
2,374,036	+				-0.5
2,374,037	-				+0.7
2,374,100	-				-1.1
2,374,174	+				-0.7
2,374,174	+				+2.5
2,374,174	+				+0.9
2,374,175	-				-1.2
2,374,175	-				-1.2
2,374,175	-				-1.8
2,374,175	-				-1.8
2,374,175	-				-0.3
2,374,175	-				-0.7
2,374,247	+				+0.2
2,374,247	+				-0.0
2,374,248	-				-0.5
2,374,248	-				-2.0
2,374,397	+				+1.5
2,374,423	+				+0.0
2,374,423	+				+0.0
2,374,424	-				+0.5
2,374,424	-				-0.9
2,374,424	-				+0.3
2,374,424	-				-0.1
2,374,430	-				+0.2
2,374,505	-				-0.5
2,374,505	-				-0.3
2,374,596	+				-0.4
2,374,597	-				+1.4
2,374,597	-				-0.5
2,374,655	+				+0.1
2,374,722	+				+0.3
2,374,722	+				+1.3
2,374,723	-				-0.9
2,374,723	-				-0.8
2,374,723	-				+3.2
2,374,784	+				+1.0
2,374,825	-				-0.1
2,374,825	-				+0.8
2,374,830	+				+2.9
2,374,831	-				-0.1
2,374,831	-				+1.7
2,374,831	-				+1.0
2,374,875	+				-0.5
2,374,875	+				+0.5
2,374,875	+				+1.1
2,374,875	+				+4.1
2,374,876	-				-3.2
2,374,876	-				+0.8
2,374,876	-				-0.9
2,374,876	-				-0.3
2,375,391	+		Psyr_2041	0.20	+0.2
2,375,391	+		Psyr_2041	0.20	+0.5
2,375,392	-		Psyr_2041	0.20	-0.8
2,375,392	-		Psyr_2041	0.20	-1.7
2,375,392	-		Psyr_2041	0.20	+0.5
2,375,392	-		Psyr_2041	0.20	-0.0
2,375,459	-		Psyr_2041	0.21	+0.7
2,375,523	+		Psyr_2041	0.23	-1.3
2,375,523	+		Psyr_2041	0.23	+0.3
2,375,523	+		Psyr_2041	0.23	-0.4
2,375,596	+		Psyr_2041	0.25	+0.8
2,375,596	+		Psyr_2041	0.25	-0.4
2,375,596	+		Psyr_2041	0.25	+0.7
2,375,597	-		Psyr_2041	0.25	+1.1
2,375,597	-		Psyr_2041	0.25	-0.6
2,375,659	-		Psyr_2041	0.26	+0.1
2,375,659	-		Psyr_2041	0.26	+0.3
2,375,659	-		Psyr_2041	0.26	+0.8
2,375,659	-		Psyr_2041	0.26	+1.4
2,375,660	+		Psyr_2041	0.26	+1.3
2,375,660	+		Psyr_2041	0.26	+2.0
2,375,661	-		Psyr_2041	0.26	+0.4
2,375,661	-		Psyr_2041	0.26	-3.2
2,375,661	-		Psyr_2041	0.26	-0.2
2,375,844	-		Psyr_2041	0.30	+0.4
2,375,865	+		Psyr_2041	0.31	+0.3
2,375,866	-		Psyr_2041	0.31	-1.8
2,375,868	+		Psyr_2041	0.31	-1.4
2,375,868	+		Psyr_2041	0.31	-1.1
2,375,868	+		Psyr_2041	0.31	+1.5
2,375,869	-		Psyr_2041	0.31	+2.1
2,375,869	-		Psyr_2041	0.31	-1.3
2,375,869	-		Psyr_2041	0.31	-0.5
2,375,869	-		Psyr_2041	0.31	-1.0
2,375,908	+		Psyr_2041	0.32	+3.1
2,375,909	-		Psyr_2041	0.32	-1.6
2,375,909	-		Psyr_2041	0.32	-0.1
2,375,909	-		Psyr_2041	0.32	-0.3
2,375,909	-		Psyr_2041	0.32	+0.5
2,375,950	-		Psyr_2041	0.33	-1.3
2,376,045	+		Psyr_2041	0.35	-0.3
2,376,046	-		Psyr_2041	0.35	-0.5
2,376,046	-		Psyr_2041	0.35	+0.3
2,376,046	-		Psyr_2041	0.35	+1.5
2,376,046	-		Psyr_2041	0.35	+0.9
2,376,122	-		Psyr_2041	0.37	+0.9
2,376,125	+		Psyr_2041	0.37	-0.2
2,376,125	+		Psyr_2041	0.37	-0.4
2,376,273	+		Psyr_2041	0.40	-2.6
2,376,273	+		Psyr_2041	0.40	+1.3
2,376,274	-		Psyr_2041	0.40	+0.1
2,376,274	-		Psyr_2041	0.40	+1.0
2,376,274	-		Psyr_2041	0.40	-1.8
2,376,376	+		Psyr_2041	0.43	+0.1
2,376,377	-		Psyr_2041	0.43	+0.1
2,376,377	-		Psyr_2041	0.43	-0.5
2,376,377	-		Psyr_2041	0.43	+1.4
2,376,377	-		Psyr_2041	0.43	+0.3
2,376,386	+		Psyr_2041	0.43	-1.8
2,376,386	+		Psyr_2041	0.43	+1.3
2,376,386	+		Psyr_2041	0.43	+1.2
2,376,386	+		Psyr_2041	0.43	+2.5
2,376,387	-		Psyr_2041	0.43	+1.7
2,376,387	-		Psyr_2041	0.43	+0.1
2,376,401	+		Psyr_2041	0.43	-0.5
2,376,519	+		Psyr_2041	0.46	+0.3
2,376,519	+		Psyr_2041	0.46	+0.5
2,376,520	-		Psyr_2041	0.46	+1.8
2,376,520	-		Psyr_2041	0.46	+0.5
2,376,547	-		Psyr_2041	0.47	+2.2
2,376,716	+		Psyr_2041	0.51	-1.8
2,376,753	-		Psyr_2041	0.52	-0.8
2,377,143	+		Psyr_2041	0.61	-0.7
2,377,143	+		Psyr_2041	0.61	-0.0
2,377,144	-		Psyr_2041	0.61	-1.5
2,377,211	+		Psyr_2041	0.62	-3.0
2,377,211	+		Psyr_2041	0.62	+0.2
2,377,212	-		Psyr_2041	0.62	-1.0
2,377,212	-		Psyr_2041	0.62	+0.1
2,377,413	+		Psyr_2041	0.67	+4.2
2,377,414	-		Psyr_2041	0.67	+0.5
2,377,414	-		Psyr_2041	0.67	+0.8
2,377,529	+		Psyr_2041	0.70	+1.2
2,377,529	+		Psyr_2041	0.70	+0.1
2,377,529	+		Psyr_2041	0.70	+0.3
2,377,530	-		Psyr_2041	0.70	+0.5
2,377,530	-		Psyr_2041	0.70	+2.5
2,377,530	-		Psyr_2041	0.70	-0.9
2,377,585	+		Psyr_2041	0.71	+0.9
2,377,585	+		Psyr_2041	0.71	+0.1
2,377,585	+		Psyr_2041	0.71	+0.0
2,377,585	+		Psyr_2041	0.71	+3.2
2,377,585	+		Psyr_2041	0.71	+0.0
2,377,585	+		Psyr_2041	0.71	+2.5
2,377,586	-		Psyr_2041	0.71	+0.9
2,377,586	-		Psyr_2041	0.71	+0.0
2,377,586	-		Psyr_2041	0.71	-0.8
2,377,586	-		Psyr_2041	0.71	+1.5
2,377,596	+		Psyr_2041	0.71	+0.9
2,377,596	+		Psyr_2041	0.71	+1.0
2,377,596	+		Psyr_2041	0.71	+0.3
2,377,596	+		Psyr_2041	0.71	+0.6
2,377,596	+		Psyr_2041	0.71	+0.1
2,377,597	-		Psyr_2041	0.71	+1.7
2,377,597	-		Psyr_2041	0.71	+1.2
2,377,597	-		Psyr_2041	0.71	-0.0
2,377,597	-		Psyr_2041	0.71	+0.5
2,377,597	-		Psyr_2041	0.71	-0.2
2,377,597	-		Psyr_2041	0.71	+1.1
2,377,599	-		Psyr_2041	0.71	-0.0
2,377,599	-		Psyr_2041	0.71	+0.2
2,377,882	+		Psyr_2041	0.78	+1.0
2,377,883	-		Psyr_2041	0.78	+0.1
2,377,883	-		Psyr_2041	0.78	+0.7
2,377,883	-		Psyr_2041	0.78	+0.1
2,377,883	-		Psyr_2041	0.78	-0.5
2,377,901	+		Psyr_2041	0.78	-0.0
2,377,901	+		Psyr_2041	0.78	+0.5
2,377,901	+		Psyr_2041	0.78	+0.7
2,377,901	+		Psyr_2041	0.78	-2.6
2,377,901	+		Psyr_2041	0.78	+0.2
2,377,901	+		Psyr_2041	0.78	+0.1
2,377,902	-		Psyr_2041	0.78	-0.5
2,377,902	-		Psyr_2041	0.78	+1.6
2,377,903	+		Psyr_2041	0.78	-0.5
2,377,904	-		Psyr_2041	0.78	-0.2
2,378,092	-		Psyr_2041	0.83	+0.7
2,378,367	+		Psyr_2041	0.89	+0.3
2,378,368	-		Psyr_2041	0.89	+0.5
2,378,368	-		Psyr_2041	0.89	+0.5
2,378,400	+		Psyr_2041	0.90	+1.0
2,378,400	+		Psyr_2041	0.90	-1.0
2,378,401	-		Psyr_2041	0.90	-2.5
2,378,401	-		Psyr_2041	0.90	-1.0
2,378,461	+				-0.9
2,378,462	-				-0.3
2,378,489	-				+0.5
2,378,670	+				+0.5
2,378,670	+				-1.0
2,378,670	+				-1.8
2,378,671	-				+1.1
2,378,671	-				-0.1
2,378,683	+				-1.8
2,378,683	+				-0.5
2,378,683	+				+0.2
2,378,746	+				+2.0
2,378,746	+				+0.3
2,378,746	+				-0.0
2,378,747	-				+1.3
2,378,854	+				-1.0
2,378,855	-				-1.2
2,378,855	-				-1.3
2,378,855	-				-1.1
2,378,855	-				-0.0
2,378,855	-				+1.0
2,378,855	-				-1.7
2,378,855	-				-0.6
2,378,858	+				-2.0
2,378,858	+				-0.3
2,378,858	+				-0.0
2,378,859	-				+1.0
2,378,859	-				+0.1
2,378,859	-				-0.4
2,378,859	-				-0.8
2,378,859	-				-1.5
2,378,859	-				-1.3
2,378,859	-				+0.8
2,378,859	-				-0.8
2,378,860	+				+1.4
2,378,861	-				-2.4
2,378,861	-				+0.7
2,378,929	+				-0.2
2,379,005	+				-0.9
2,379,006	-				+0.4
2,379,006	-				+2.1
2,379,055	+				-1.0
2,379,055	+				+0.0
2,379,056	-				-0.1
2,379,191	-				+0.2
2,379,242	+				+1.4
2,379,289	+				+0.8
2,379,313	-				-0.5
2,379,432	+		Psyr_2042	0.11	+0.5
2,379,433	-		Psyr_2042	0.11	-0.0
2,379,533	-		Psyr_2042	0.12	-1.8