Experiment: RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26775 and BWI76_RS26780 are separated by 3 nucleotides BWI76_RS26780 and BWI76_RS26785 are separated by 10 nucleotides
BWI76_RS26775: BWI76_RS26775 - endo-1,4-D-glucanase, at 5,549,842 to 5,550,951
_RS26775
BWI76_RS26780: BWI76_RS26780 - cellulose synthase regulator BcsB, at 5,550,955 to 5,553,288
_RS26780
BWI76_RS26785: BWI76_RS26785 - UDP-forming cellulose synthase catalytic subunit, at 5,553,299 to 5,555,917
_RS26785
Position (kb) 5550
5551
5552
5553
5554 Strain fitness (log2 ratio) -2
-1
0
1 at 5549.961 kb on - strand, within BWI76_RS26775 at 5550.115 kb on + strand, within BWI76_RS26775 at 5550.227 kb on - strand, within BWI76_RS26775 at 5550.407 kb on - strand, within BWI76_RS26775 at 5550.585 kb on - strand, within BWI76_RS26775 at 5550.594 kb on + strand, within BWI76_RS26775 at 5550.627 kb on - strand, within BWI76_RS26775 at 5550.637 kb on - strand, within BWI76_RS26775 at 5550.639 kb on - strand, within BWI76_RS26775 at 5550.726 kb on + strand, within BWI76_RS26775 at 5550.763 kb on + strand, within BWI76_RS26775 at 5550.768 kb on + strand, within BWI76_RS26775 at 5550.887 kb on + strand at 5551.134 kb on + strand at 5551.540 kb on - strand, within BWI76_RS26780 at 5551.766 kb on + strand, within BWI76_RS26780 at 5551.771 kb on + strand, within BWI76_RS26780 at 5551.771 kb on + strand, within BWI76_RS26780 at 5551.779 kb on - strand, within BWI76_RS26780 at 5551.779 kb on - strand, within BWI76_RS26780 at 5551.790 kb on + strand, within BWI76_RS26780 at 5551.790 kb on + strand, within BWI76_RS26780 at 5551.798 kb on - strand, within BWI76_RS26780 at 5551.940 kb on + strand, within BWI76_RS26780 at 5552.286 kb on - strand, within BWI76_RS26780 at 5552.290 kb on + strand, within BWI76_RS26780 at 5552.295 kb on + strand, within BWI76_RS26780 at 5552.797 kb on - strand, within BWI76_RS26780 at 5552.936 kb on - strand, within BWI76_RS26780 at 5553.030 kb on + strand, within BWI76_RS26780 at 5553.038 kb on - strand, within BWI76_RS26780 at 5553.038 kb on - strand, within BWI76_RS26780 at 5553.048 kb on - strand, within BWI76_RS26780 at 5553.055 kb on - strand at 5553.370 kb on + strand at 5553.442 kb on + strand at 5553.510 kb on + strand at 5553.510 kb on + strand at 5553.549 kb on + strand at 5553.598 kb on + strand, within BWI76_RS26785 at 5553.626 kb on - strand, within BWI76_RS26785 at 5553.648 kb on + strand, within BWI76_RS26785 at 5553.767 kb on - strand, within BWI76_RS26785 at 5553.767 kb on - strand, within BWI76_RS26785 at 5553.846 kb on - strand, within BWI76_RS26785 at 5553.859 kb on + strand, within BWI76_RS26785 at 5553.966 kb on - strand, within BWI76_RS26785 at 5554.076 kb on - strand, within BWI76_RS26785 at 5554.083 kb on + strand, within BWI76_RS26785 at 5554.113 kb on + strand, within BWI76_RS26785 at 5554.124 kb on - strand, within BWI76_RS26785 at 5554.132 kb on - strand, within BWI76_RS26785 at 5554.180 kb on - strand, within BWI76_RS26785 at 5554.190 kb on + strand, within BWI76_RS26785
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM remove 5,549,961 - BWI76_RS26775 0.11 -0.1 5,550,115 + BWI76_RS26775 0.25 -0.8 5,550,227 - BWI76_RS26775 0.35 +1.0 5,550,407 - BWI76_RS26775 0.51 -0.2 5,550,585 - BWI76_RS26775 0.67 -0.3 5,550,594 + BWI76_RS26775 0.68 -1.0 5,550,627 - BWI76_RS26775 0.71 -1.0 5,550,637 - BWI76_RS26775 0.72 -0.1 5,550,639 - BWI76_RS26775 0.72 -0.4 5,550,726 + BWI76_RS26775 0.80 -1.3 5,550,763 + BWI76_RS26775 0.83 -0.9 5,550,768 + BWI76_RS26775 0.83 -0.8 5,550,887 + -2.2 5,551,134 + +0.6 5,551,540 - BWI76_RS26780 0.25 +1.1 5,551,766 + BWI76_RS26780 0.35 -0.1 5,551,771 + BWI76_RS26780 0.35 +0.0 5,551,771 + BWI76_RS26780 0.35 +0.3 5,551,779 - BWI76_RS26780 0.35 +0.5 5,551,779 - BWI76_RS26780 0.35 -0.8 5,551,790 + BWI76_RS26780 0.36 +1.4 5,551,790 + BWI76_RS26780 0.36 -0.1 5,551,798 - BWI76_RS26780 0.36 -0.5 5,551,940 + BWI76_RS26780 0.42 +0.7 5,552,286 - BWI76_RS26780 0.57 +0.2 5,552,290 + BWI76_RS26780 0.57 +0.5 5,552,295 + BWI76_RS26780 0.57 +0.2 5,552,797 - BWI76_RS26780 0.79 +0.2 5,552,936 - BWI76_RS26780 0.85 +0.4 5,553,030 + BWI76_RS26780 0.89 -1.4 5,553,038 - BWI76_RS26780 0.89 +0.5 5,553,038 - BWI76_RS26780 0.89 +1.1 5,553,048 - BWI76_RS26780 0.90 +0.2 5,553,055 - +0.1 5,553,370 + +0.2 5,553,442 + -0.1 5,553,510 + +0.3 5,553,510 + -0.7 5,553,549 + +0.9 5,553,598 + BWI76_RS26785 0.11 +0.4 5,553,626 - BWI76_RS26785 0.12 -0.2 5,553,648 + BWI76_RS26785 0.13 +1.2 5,553,767 - BWI76_RS26785 0.18 +0.2 5,553,767 - BWI76_RS26785 0.18 +1.3 5,553,846 - BWI76_RS26785 0.21 -0.3 5,553,859 + BWI76_RS26785 0.21 +0.4 5,553,966 - BWI76_RS26785 0.25 -0.5 5,554,076 - BWI76_RS26785 0.30 +0.3 5,554,083 + BWI76_RS26785 0.30 +0.3 5,554,113 + BWI76_RS26785 0.31 +0.3 5,554,124 - BWI76_RS26785 0.32 -0.1 5,554,132 - BWI76_RS26785 0.32 -0.4 5,554,180 - BWI76_RS26785 0.34 +0.4 5,554,190 + BWI76_RS26785 0.34 +1.1
Or see this region's nucleotide sequence