Experiment: RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21915 and BWI76_RS21920 are separated by 6 nucleotides BWI76_RS21920 and BWI76_RS21925 are separated by 19 nucleotides BWI76_RS21925 and BWI76_RS21930 are separated by 134 nucleotides
BWI76_RS21915: BWI76_RS21915 - short-chain dehydrogenase/reductase SDR, at 4,579,267 to 4,580,061
_RS21915
BWI76_RS21920: BWI76_RS21920 - amino acid ABC transporter substrate-binding protein, at 4,580,068 to 4,580,284
_RS21920
BWI76_RS21925: BWI76_RS21925 - agmatinase, at 4,580,304 to 4,581,275
_RS21925
BWI76_RS21930: BWI76_RS21930 - LysR family transcriptional regulator, at 4,581,410 to 4,582,312
_RS21930
Position (kb)
4580
4581
4582 Strain fitness (log2 ratio)
-1
0
1 at 4579.405 kb on + strand, within BWI76_RS21915 at 4579.405 kb on + strand, within BWI76_RS21915 at 4579.660 kb on + strand, within BWI76_RS21915 at 4579.683 kb on - strand, within BWI76_RS21915 at 4579.991 kb on + strand at 4580.000 kb on + strand at 4580.073 kb on + strand at 4580.143 kb on - strand, within BWI76_RS21920 at 4580.145 kb on - strand, within BWI76_RS21920 at 4580.152 kb on + strand, within BWI76_RS21920 at 4580.152 kb on + strand, within BWI76_RS21920 at 4580.595 kb on + strand, within BWI76_RS21925 at 4580.630 kb on + strand, within BWI76_RS21925 at 4580.673 kb on + strand, within BWI76_RS21925 at 4580.673 kb on - strand, within BWI76_RS21925 at 4580.998 kb on + strand, within BWI76_RS21925 at 4581.154 kb on + strand, within BWI76_RS21925 at 4581.159 kb on + strand, within BWI76_RS21925 at 4581.167 kb on - strand, within BWI76_RS21925 at 4581.284 kb on + strand at 4581.284 kb on + strand at 4581.284 kb on + strand at 4581.292 kb on - strand at 4581.404 kb on - strand at 4581.483 kb on - strand at 4581.506 kb on - strand, within BWI76_RS21930 at 4581.723 kb on + strand, within BWI76_RS21930 at 4581.811 kb on + strand at 4581.947 kb on + strand, within BWI76_RS21930 at 4582.053 kb on + strand, within BWI76_RS21930 at 4582.101 kb on + strand, within BWI76_RS21930 at 4582.148 kb on + strand, within BWI76_RS21930 at 4582.175 kb on - strand, within BWI76_RS21930 at 4582.253 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM remove 4,579,405 + BWI76_RS21915 0.17 +0.3 4,579,405 + BWI76_RS21915 0.17 -0.2 4,579,660 + BWI76_RS21915 0.49 -0.4 4,579,683 - BWI76_RS21915 0.52 -0.2 4,579,991 + +1.1 4,580,000 + -0.4 4,580,073 + -0.0 4,580,143 - BWI76_RS21920 0.35 -0.1 4,580,145 - BWI76_RS21920 0.35 +0.0 4,580,152 + BWI76_RS21920 0.39 -0.1 4,580,152 + BWI76_RS21920 0.39 -0.1 4,580,595 + BWI76_RS21925 0.30 +0.0 4,580,630 + BWI76_RS21925 0.34 +0.3 4,580,673 + BWI76_RS21925 0.38 -0.4 4,580,673 - BWI76_RS21925 0.38 +1.1 4,580,998 + BWI76_RS21925 0.71 +0.7 4,581,154 + BWI76_RS21925 0.87 +0.8 4,581,159 + BWI76_RS21925 0.88 -1.7 4,581,167 - BWI76_RS21925 0.89 -0.1 4,581,284 + -0.2 4,581,284 + +0.7 4,581,284 + +0.4 4,581,292 - -0.2 4,581,404 - +1.0 4,581,483 - +0.2 4,581,506 - BWI76_RS21930 0.11 -0.6 4,581,723 + BWI76_RS21930 0.35 +1.1 4,581,811 + -0.2 4,581,947 + BWI76_RS21930 0.59 +0.1 4,582,053 + BWI76_RS21930 0.71 -0.3 4,582,101 + BWI76_RS21930 0.77 +0.1 4,582,148 + BWI76_RS21930 0.82 -0.2 4,582,175 - BWI76_RS21930 0.85 -0.9 4,582,253 + +0.5
Or see this region's nucleotide sequence