Experiment: RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13900 and BWI76_RS13905 are separated by 17 nucleotides BWI76_RS13905 and BWI76_RS13910 are separated by 288 nucleotides
BWI76_RS13900: BWI76_RS13900 - MFS transporter, at 2,899,531 to 2,900,694
_RS13900
BWI76_RS13905: BWI76_RS13905 - MFS transporter, at 2,900,712 to 2,902,121
_RS13905
BWI76_RS13910: BWI76_RS13910 - hypothetical protein, at 2,902,410 to 2,902,919
_RS13910
Position (kb)
2900
2901
2902
2903 Strain fitness (log2 ratio)
-1
0
1
2 at 2899.742 kb on - strand at 2899.789 kb on - strand, within BWI76_RS13900 at 2900.337 kb on + strand, within BWI76_RS13900 at 2900.752 kb on + strand at 2900.881 kb on - strand, within BWI76_RS13905 at 2900.925 kb on + strand, within BWI76_RS13905 at 2901.307 kb on - strand, within BWI76_RS13905 at 2901.466 kb on + strand, within BWI76_RS13905 at 2901.556 kb on - strand, within BWI76_RS13905 at 2901.669 kb on - strand, within BWI76_RS13905 at 2901.703 kb on - strand, within BWI76_RS13905 at 2901.945 kb on + strand at 2902.093 kb on + strand at 2902.285 kb on + strand at 2902.594 kb on + strand, within BWI76_RS13910 at 2902.685 kb on + strand, within BWI76_RS13910 at 2902.757 kb on + strand, within BWI76_RS13910 at 2902.765 kb on - strand, within BWI76_RS13910 at 2902.810 kb on - strand, within BWI76_RS13910 at 2902.822 kb on + strand, within BWI76_RS13910 at 2902.822 kb on - strand, within BWI76_RS13910 at 2902.830 kb on - strand, within BWI76_RS13910 at 2902.848 kb on + strand, within BWI76_RS13910 at 2902.856 kb on - strand, within BWI76_RS13910 at 2902.874 kb on + strand at 2902.884 kb on - strand at 2902.935 kb on - strand at 2902.937 kb on + strand at 2902.945 kb on - strand at 2902.951 kb on - strand at 2902.956 kb on - strand at 2902.972 kb on + strand at 2902.972 kb on + strand at 2902.972 kb on + strand at 2902.972 kb on + strand at 2902.980 kb on - strand at 2902.980 kb on - strand at 2902.980 kb on - strand at 2902.982 kb on + strand at 2903.038 kb on + strand at 2903.038 kb on + strand at 2903.046 kb on - strand at 2903.063 kb on + strand at 2903.079 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM remove 2,899,742 - +1.6 2,899,789 - BWI76_RS13900 0.22 -0.3 2,900,337 + BWI76_RS13900 0.69 +0.9 2,900,752 + -1.3 2,900,881 - BWI76_RS13905 0.12 +0.9 2,900,925 + BWI76_RS13905 0.15 +0.4 2,901,307 - BWI76_RS13905 0.42 -0.8 2,901,466 + BWI76_RS13905 0.53 -0.1 2,901,556 - BWI76_RS13905 0.60 +0.9 2,901,669 - BWI76_RS13905 0.68 +0.5 2,901,703 - BWI76_RS13905 0.70 +0.0 2,901,945 + +2.2 2,902,093 + -0.3 2,902,285 + +0.7 2,902,594 + BWI76_RS13910 0.36 -0.2 2,902,685 + BWI76_RS13910 0.54 -0.3 2,902,757 + BWI76_RS13910 0.68 +0.3 2,902,765 - BWI76_RS13910 0.70 +0.2 2,902,810 - BWI76_RS13910 0.78 -0.1 2,902,822 + BWI76_RS13910 0.81 -0.5 2,902,822 - BWI76_RS13910 0.81 +0.1 2,902,830 - BWI76_RS13910 0.82 +0.4 2,902,848 + BWI76_RS13910 0.86 +0.5 2,902,856 - BWI76_RS13910 0.87 +0.7 2,902,874 + -0.6 2,902,884 - -0.5 2,902,935 - -0.4 2,902,937 + -0.1 2,902,945 - +0.1 2,902,951 - +0.1 2,902,956 - -1.6 2,902,972 + -0.8 2,902,972 + +0.4 2,902,972 + -1.3 2,902,972 + +0.3 2,902,980 - -0.1 2,902,980 - -0.3 2,902,980 - +0.5 2,902,982 + +0.1 2,903,038 + -0.8 2,903,038 + -0.5 2,903,046 - -1.0 2,903,063 + -0.4 2,903,079 + -0.4
Or see this region's nucleotide sequence