Experiment: RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11620 and BWI76_RS11625 are separated by 86 nucleotides BWI76_RS11625 and BWI76_RS11630 are separated by 140 nucleotides BWI76_RS11630 and BWI76_RS11635 are separated by 78 nucleotides BWI76_RS11635 and BWI76_RS11640 overlap by 1 nucleotides
BWI76_RS11620: BWI76_RS11620 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase, at 2,445,578 to 2,445,988
_RS11620
BWI76_RS11625: BWI76_RS11625 - membrane protein, at 2,446,075 to 2,446,692
_RS11625
BWI76_RS11630: BWI76_RS11630 - sulfurtransferase, at 2,446,833 to 2,448,140
_RS11630
BWI76_RS11635: BWI76_RS11635 - ABC transporter, at 2,448,219 to 2,448,851
_RS11635
BWI76_RS11640: BWI76_RS11640 - ABC transporter membrane protein, at 2,448,851 to 2,450,386
_RS11640
Position (kb)
2446
2447
2448
2449 Strain fitness (log2 ratio)
-1
0
1 at 2446.039 kb on - strand at 2446.640 kb on + strand at 2446.658 kb on - strand at 2446.688 kb on - strand at 2446.745 kb on - strand at 2447.274 kb on - strand, within BWI76_RS11630 at 2447.385 kb on + strand, within BWI76_RS11630 at 2447.503 kb on + strand, within BWI76_RS11630 at 2447.756 kb on - strand, within BWI76_RS11630 at 2447.864 kb on - strand, within BWI76_RS11630 at 2447.902 kb on - strand, within BWI76_RS11630 at 2448.372 kb on - strand, within BWI76_RS11635 at 2448.574 kb on + strand, within BWI76_RS11635 at 2448.798 kb on + strand at 2448.862 kb on - strand at 2448.929 kb on - strand at 2448.964 kb on - strand at 2449.006 kb on - strand, within BWI76_RS11640
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM remove 2,446,039 - -0.6 2,446,640 + -0.0 2,446,658 - -0.3 2,446,688 - +0.1 2,446,745 - -0.1 2,447,274 - BWI76_RS11630 0.34 +0.9 2,447,385 + BWI76_RS11630 0.42 +0.1 2,447,503 + BWI76_RS11630 0.51 +0.9 2,447,756 - BWI76_RS11630 0.71 +0.4 2,447,864 - BWI76_RS11630 0.79 -0.4 2,447,902 - BWI76_RS11630 0.82 +0.1 2,448,372 - BWI76_RS11635 0.24 -1.0 2,448,574 + BWI76_RS11635 0.56 -0.5 2,448,798 + +0.4 2,448,862 - -0.3 2,448,929 - +0.1 2,448,964 - -0.1 2,449,006 - BWI76_RS11640 0.10 -0.1
Or see this region's nucleotide sequence