Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003516

Experiment: RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM
3,941,983	+		ABIE53_003515	0.56	-0.9
3,941,983	+		ABIE53_003515	0.56	-0.1
3,941,983	+		ABIE53_003515	0.56	-0.6
3,941,983	+		ABIE53_003515	0.56	+0.5
3,941,983	+		ABIE53_003515	0.56	-0.6
3,941,983	+		ABIE53_003515	0.56	+1.7
3,941,984	-		ABIE53_003515	0.56	-1.4
3,941,984	-		ABIE53_003515	0.56	-2.0
3,941,984	-		ABIE53_003515	0.56	+0.1
3,941,984	-		ABIE53_003515	0.56	+0.7
3,942,024	-		ABIE53_003515	0.58	+1.0
3,942,052	+		ABIE53_003515	0.61	+1.3
3,942,052	+		ABIE53_003515	0.61	-0.5
3,942,052	+		ABIE53_003515	0.61	+0.4
3,942,052	+		ABIE53_003515	0.61	-1.2
3,942,053	-		ABIE53_003515	0.61	-0.3
3,942,053	-		ABIE53_003515	0.61	-0.9
3,942,053	-		ABIE53_003515	0.61	+0.4
3,942,053	-		ABIE53_003515	0.61	+1.1
3,942,053	-		ABIE53_003515	0.61	+1.9
3,942,053	-		ABIE53_003515	0.61	+1.8
3,942,053	-		ABIE53_003515	0.61	+1.0
3,942,053	-		ABIE53_003515	0.61	-0.3
3,942,053	-		ABIE53_003515	0.61	+0.9
3,942,082	+		ABIE53_003515	0.63	-1.0
3,942,082	+		ABIE53_003515	0.63	-0.4
3,942,082	+		ABIE53_003515	0.63	-1.1
3,942,082	+		ABIE53_003515	0.63	-0.6
3,942,082	+		ABIE53_003515	0.63	-2.0
3,942,083	-		ABIE53_003515	0.63	+1.9
3,942,083	-		ABIE53_003515	0.63	+0.3
3,942,083	-		ABIE53_003515	0.63	-0.5
3,942,083	-		ABIE53_003515	0.63	-0.3
3,942,083	-		ABIE53_003515	0.63	-0.5
3,942,293	+		ABIE53_003515	0.78	-0.2
3,942,293	+		ABIE53_003515	0.78	-0.9
3,942,293	+		ABIE53_003515	0.78	+0.8
3,942,293	+		ABIE53_003515	0.78	-0.2
3,942,294	-		ABIE53_003515	0.78	-0.3
3,942,294	-		ABIE53_003515	0.78	+2.4
3,942,294	-		ABIE53_003515	0.78	+0.1
3,942,294	-		ABIE53_003515	0.78	+0.4
3,942,294	-		ABIE53_003515	0.78	-0.3
3,942,294	-		ABIE53_003515	0.78	-1.5
3,942,294	-		ABIE53_003515	0.78	+0.1
3,942,294	-		ABIE53_003515	0.78	-1.8
3,942,515	-				+0.4
3,942,515	-				+0.1
3,942,523	+				-2.0
3,942,523	+				+0.3
3,942,523	+				-0.1
3,942,523	+				+0.6
3,942,523	+				+0.4
3,942,523	+				+0.7
3,942,523	+				-0.3
3,942,523	+				-2.3
3,942,524	-				-1.2
3,942,524	-				-0.4
3,942,524	-				-0.3
3,942,524	-				-0.5
3,942,710	+				+0.3
3,942,711	-				-0.3
3,942,791	+				+0.6
3,942,791	+				-1.2
3,942,791	+				+0.4
3,942,874	+				+0.1
3,942,874	+				+1.5
3,942,874	+				-1.0
3,942,875	-				-0.7
3,943,498	-				-2.4
3,943,515	-				-2.0
3,943,515	-				-0.3
3,943,515	-				-1.6
3,943,636	-				-0.5
3,943,636	-				-0.8
3,943,636	-				+0.4
3,943,658	-				+1.1
3,943,794	-				-1.3
3,944,003	-		ABIE53_003517	0.19	-0.6
3,944,413	-		ABIE53_003517	0.40	-2.2