Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002301

Experiment: RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM
2,582,405	+				+1.7
2,582,405	+				-1.8
2,582,405	+				-2.3
2,582,405	+				-0.3
2,582,406	-				-1.4
2,583,057	-				+0.3
2,583,057	-				-2.1
2,583,191	-				+3.0
2,583,215	+				+0.1
2,583,216	-				-0.4
2,583,239	+				+1.6
2,583,240	-				+1.7
2,583,309	+				-1.6
2,583,309	+				-0.0
2,583,310	-				+1.7
2,583,310	-				+0.5
2,583,310	-				+0.4
2,583,310	-				+1.7
2,583,447	+		ABIE53_002301	0.14	+1.3
2,583,447	+		ABIE53_002301	0.14	+0.7
2,583,448	-		ABIE53_002301	0.14	-1.7
2,583,448	-		ABIE53_002301	0.14	+0.0
2,583,492	-		ABIE53_002301	0.17	-0.5
2,583,492	-		ABIE53_002301	0.17	-0.7
2,583,539	+		ABIE53_002301	0.20	-0.3
2,583,539	+		ABIE53_002301	0.20	+0.2
2,583,539	+		ABIE53_002301	0.20	+0.5
2,583,540	-		ABIE53_002301	0.20	+1.9
2,583,548	+		ABIE53_002301	0.21	-0.5
2,583,548	+		ABIE53_002301	0.21	+0.7
2,583,548	+		ABIE53_002301	0.21	-1.4
2,583,548	+		ABIE53_002301	0.21	+0.4
2,583,548	+		ABIE53_002301	0.21	+0.9
2,583,549	-		ABIE53_002301	0.21	-0.6
2,583,549	-		ABIE53_002301	0.21	-1.0
2,583,549	-		ABIE53_002301	0.21	-0.8
2,583,549	-		ABIE53_002301	0.21	-0.7
2,583,668	+		ABIE53_002301	0.29	+1.2
2,583,668	+		ABIE53_002301	0.29	-1.6
2,584,131	+		ABIE53_002301	0.60	-1.3
2,584,132	-		ABIE53_002301	0.60	-1.6
2,584,137	-		ABIE53_002301	0.61	-1.3
2,584,142	+		ABIE53_002301	0.61	+0.0
2,584,142	+		ABIE53_002301	0.61	-0.7
2,584,260	-		ABIE53_002301	0.69	-0.3
2,584,260	-		ABIE53_002301	0.69	-2.3
2,584,310	+		ABIE53_002301	0.72	+0.9
2,584,480	-		ABIE53_002301	0.84	+0.2
2,584,480	-		ABIE53_002301	0.84	-1.4
2,585,178	+				+0.2
2,585,226	+		ABIE53_002303	0.14	+1.5
2,585,227	-		ABIE53_002303	0.14	+0.1
2,585,336	-		ABIE53_002303	0.31	-0.5
2,585,370	+		ABIE53_002303	0.36	-0.3
2,585,371	-		ABIE53_002303	0.36	+1.0
2,585,392	-		ABIE53_002303	0.39	-0.1