Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3759

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
4,878,707	-		BT3758	0.21	-2.5
4,878,806	+		BT3758	0.30	-1.3
4,878,852	+		BT3758	0.34	-1.6
4,879,065	+		BT3758	0.53	-2.4
4,879,089	+		BT3758	0.55	-2.5
4,879,218	-		BT3758	0.66	-2.4
4,879,320	-		BT3758	0.75	-3.2
4,879,343	-		BT3758	0.77	-2.6
4,879,426	-		BT3758	0.85	-6.3
4,879,507	+				-2.0
4,879,556	+				-3.5
4,879,557	-				-3.5
4,879,569	+				-3.5
4,879,578	+				-4.5
4,879,579	-				-2.5
4,879,725	+		BT3759	0.12	-3.7
4,879,725	+		BT3759	0.12	+0.5
4,879,759	+		BT3759	0.15	-6.6
4,879,781	-		BT3759	0.18	-0.8
4,879,801	-		BT3759	0.20	-4.8
4,879,811	-		BT3759	0.21	-4.5
4,879,842	-		BT3759	0.24	-3.6
4,879,842	-		BT3759	0.24	-3.5
4,879,938	+		BT3759	0.34	-6.3
4,880,025	-		BT3759	0.43	-3.3
4,880,025	-		BT3759	0.43	-1.0
4,880,028	+		BT3759	0.43	-2.2
4,880,028	+		BT3759	0.43	-3.3
4,880,037	+		BT3759	0.44	-3.8
4,880,038	-		BT3759	0.44	-2.8
4,880,176	-		BT3759	0.59	-1.3
4,880,218	-		BT3759	0.63	-3.2
4,880,246	+		BT3759	0.66	-3.9
4,880,375	-		BT3759	0.79	-4.3
4,880,375	-		BT3759	0.79	-4.3
4,880,381	-		BT3759	0.80	-0.8
4,880,429	+		BT3759	0.85	-5.4
4,880,542	-				-1.9
4,880,591	+				-0.8
4,880,602	+				-4.5
4,880,606	-				-7.4
4,880,622	-				-6.4
4,880,628	+				-2.0
4,880,629	-				-3.0
4,880,634	-				-2.2
4,880,808	+		BT3760	0.19	-2.2
4,880,890	+		BT3760	0.26	-3.2
4,880,914	+		BT3760	0.28	-2.3
4,881,014	+		BT3760	0.36	-6.5
4,881,014	+		BT3760	0.36	-3.3
4,881,015	-		BT3760	0.36	-3.7
4,881,051	+		BT3760	0.39	+0.5
4,881,170	-		BT3760	0.49	-2.9
4,881,240	+		BT3760	0.55	-2.3
4,881,240	+		BT3760	0.55	-4.8
4,881,248	-		BT3760	0.56	-2.5
4,881,248	-		BT3760	0.56	-2.4
4,881,322	-		BT3760	0.62	-2.9
4,881,486	-		BT3760	0.75	-2.9
4,881,512	-		BT3760	0.78	-2.8