Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1474

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
1,814,661	-		BT1472	0.62	-1.3
1,814,712	-		BT1472	0.66	-0.7
1,814,721	+		BT1472	0.67	-2.7
1,814,729	+		BT1472	0.68	-1.7
1,814,730	-		BT1472	0.68	-0.0
1,814,771	+		BT1472	0.71	-0.4
1,814,777	-		BT1472	0.72	-0.7
1,814,777	-		BT1472	0.72	+1.6
1,814,815	+		BT1472	0.75	-0.7
1,814,952	-		BT1472	0.87	-1.9
1,815,163	+				-0.2
1,815,166	+		BT1473	0.10	+0.7
1,815,209	-		BT1473	0.20	-0.3
1,815,211	-		BT1473	0.20	-1.4
1,815,228	-				-0.0
1,815,266	+		BT1473	0.32	-1.8
1,815,558	+				-0.9
1,815,559	-				-0.9
1,815,576	+				-0.9
1,815,627	+				+0.2
1,815,801	+		BT1474	0.15	+1.3
1,815,806	-		BT1474	0.16	-0.4
1,815,883	+		BT1474	0.21	-0.0
1,815,884	-		BT1474	0.21	-1.2
1,815,885	+		BT1474	0.21	-1.7
1,815,888	+				-0.7
1,815,888	+		BT1474	0.21	-3.5
1,815,900	+		BT1474	0.22	-1.2
1,815,900	+		BT1474	0.22	-2.5
1,815,901	-		BT1474	0.22	-0.8
1,815,908	+		BT1474	0.23	-0.3
1,815,908	+		BT1474	0.23	-2.3
1,816,051	-		BT1474	0.32	-1.0
1,816,141	+		BT1474	0.39	-1.3
1,816,142	-		BT1474	0.39	-1.3
1,816,195	+		BT1474	0.42	-0.5
1,816,277	-		BT1474	0.48	-0.2
1,816,582	+		BT1474	0.69	+0.1
1,816,641	+		BT1474	0.73	-1.3
1,816,642	-		BT1474	0.73	-2.4
1,816,642	-		BT1474	0.73	-1.2
1,816,642	-		BT1474	0.73	-0.7
1,816,705	+		BT1474	0.77	-1.0
1,816,705	+		BT1474	0.77	-1.7
1,816,872	+		BT1474	0.88	-1.9
1,816,872	+		BT1474	0.88	-1.3
1,816,888	+		BT1474	0.90	-1.7
1,816,891	-		BT1474	0.90	+0.6
1,816,915	+				-1.3
1,816,956	+				+0.2
1,817,014	+				-1.0
1,817,015	-				-1.7
1,817,071	+				-0.8
1,817,093	+				-1.4
1,817,105	-				+1.6
1,817,105	-				+0.8
1,817,114	-				+0.8
1,817,114	-				+1.8
1,817,173	+				-0.9