Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1336

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
1,661,871	-		BT1336	0.26	-1.0
1,661,875	+		BT1336	0.27	-2.3
1,661,878	-		BT1336	0.28	-3.4
1,661,907	-		BT1336	0.36	-1.3
1,661,919	+		BT1336	0.39	-4.7
1,661,931	+		BT1336	0.42	-3.0
1,661,932	-		BT1336	0.43	-1.3
1,662,095	+		BT1336	0.86	-2.2
1,662,147	-				-1.3
1,662,169	+				-1.8
1,662,358	+		BT1337	0.23	+0.5
1,662,358	+		BT1337	0.23	-0.5
1,662,359	-		BT1337	0.23	-1.9
1,662,421	-		BT1337	0.36	-0.3
1,662,421	-		BT1337	0.36	-0.6
1,662,527	+		BT1337	0.58	-0.5
1,662,529	+		BT1337	0.59	-2.2
1,662,530	-		BT1337	0.59	+0.4
1,662,614	-		BT1337	0.77	+0.4
1,662,661	+		BT1337	0.86	-0.5
1,662,675	+		BT1337	0.89	-0.8
1,662,761	+				-0.0
1,662,775	+				-1.0
1,662,791	+				-1.5
1,662,900	+				+1.3
1,663,130	+				+0.5