Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0789

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.2 mg/ml
977,571	+		BT0788	0.30	-0.9
977,590	+		BT0788	0.32	-0.1
977,595	+		BT0788	0.33	-0.6
977,604	+		BT0788	0.33	+0.1
977,624	+		BT0788	0.35	-1.2
977,718	+		BT0788	0.43	-0.3
977,718	+		BT0788	0.43	-0.5
977,755	+		BT0788	0.47	-1.1
977,756	-		BT0788	0.47	-1.7
978,054	-		BT0788	0.73	+0.3
978,054	-		BT0788	0.73	-0.8
978,092	-		BT0788	0.76	+0.1
978,139	-		BT0788	0.81	+0.6
978,150	-		BT0788	0.82	+0.7
978,165	+		BT0788	0.83	+0.3
978,254	+				+0.2
978,254	+				-1.2
978,286	+				+1.7
978,350	-				-0.5
978,386	-				+0.1
978,386	-				-0.3
978,457	+				+1.2
978,457	+				-1.5
978,523	+				-0.9
978,524	-				-1.7
978,542	+				+0.1
978,559	-				+0.1
979,573	+				-0.9
979,573	+				-1.7
979,573	+				-0.7
979,608	+		BT0790	0.14	-2.6
979,721	-		BT0790	0.27	-0.7
979,737	-		BT0790	0.29	-1.9
979,742	+		BT0790	0.30	-3.0
979,765	+		BT0790	0.32	-2.1
979,925	-		BT0790	0.51	-3.2
980,018	+		BT0790	0.62	-0.9
980,240	-		BT0790	0.89	-2.6
980,412	-				-0.3