Experiment: KB with Novobiocin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4758 and Psyr_4759 are separated by 98 nucleotides Psyr_4759 and Psyr_4760 are separated by 9 nucleotides Psyr_4760 and Psyr_4761 are separated by 97 nucleotides Psyr_4761 and Psyr_4762 are separated by 45 nucleotides
Psyr_4758: Psyr_4758 - Phosphopantetheine adenylyltransferase, at 5,634,887 to 5,635,366
_4758
Psyr_4759: Psyr_4759 - 4Fe-4S ferredoxin, iron-sulfur binding protein, at 5,635,465 to 5,635,716
_4759
Psyr_4760: Psyr_4760 - conserved hypothetical protein, at 5,635,726 to 5,636,064
_4760
Psyr_4761: Psyr_4761 - DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase, at 5,636,162 to 5,636,974
_4761
Psyr_4762: Psyr_4762 - conserved hypothetical protein, at 5,637,020 to 5,637,886
_4762
Position (kb) 5636
5637 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5635.365 kb on - strand at 5635.428 kb on + strand at 5635.727 kb on + strand at 5635.728 kb on - strand at 5635.958 kb on + strand, within Psyr_4760 at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.090 kb on + strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.091 kb on - strand at 5636.094 kb on + strand at 5636.094 kb on + strand at 5636.094 kb on + strand at 5636.095 kb on - strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.108 kb on + strand at 5636.109 kb on - strand at 5636.109 kb on - strand at 5636.109 kb on - strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.110 kb on + strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.111 kb on - strand at 5636.128 kb on - strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.158 kb on + strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.159 kb on - strand at 5636.184 kb on + strand at 5636.185 kb on - strand at 5636.185 kb on - strand at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.460 kb on + strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.461 kb on - strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.464 kb on + strand, within Psyr_4761 at 5636.465 kb on - strand, within Psyr_4761 at 5636.541 kb on + strand, within Psyr_4761 at 5636.659 kb on - strand, within Psyr_4761 at 5636.799 kb on + strand, within Psyr_4761 at 5636.799 kb on + strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.800 kb on - strand, within Psyr_4761 at 5636.964 kb on - strand at 5636.964 kb on - strand at 5637.057 kb on + strand at 5637.057 kb on + strand at 5637.069 kb on + strand at 5637.070 kb on - strand at 5637.087 kb on + strand at 5637.087 kb on + strand at 5637.087 kb on + strand at 5637.087 kb on + strand at 5637.088 kb on - strand at 5637.166 kb on + strand, within Psyr_4762 at 5637.166 kb on + strand, within Psyr_4762 at 5637.166 kb on + strand, within Psyr_4762 at 5637.166 kb on + strand, within Psyr_4762 at 5637.167 kb on - strand, within Psyr_4762 at 5637.167 kb on - strand, within Psyr_4762 at 5637.167 kb on - strand at 5637.214 kb on + strand, within Psyr_4762 at 5637.309 kb on + strand, within Psyr_4762 at 5637.309 kb on + strand, within Psyr_4762 at 5637.309 kb on + strand, within Psyr_4762 at 5637.310 kb on - strand, within Psyr_4762 at 5637.310 kb on - strand, within Psyr_4762 at 5637.310 kb on - strand, within Psyr_4762 at 5637.310 kb on - strand, within Psyr_4762 at 5637.391 kb on - strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.414 kb on + strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.415 kb on - strand, within Psyr_4762 at 5637.474 kb on + strand, within Psyr_4762 at 5637.474 kb on + strand, within Psyr_4762 at 5637.474 kb on + strand, within Psyr_4762 at 5637.474 kb on + strand, within Psyr_4762 at 5637.474 kb on + strand, within Psyr_4762 at 5637.475 kb on - strand, within Psyr_4762 at 5637.475 kb on - strand, within Psyr_4762 at 5637.475 kb on - strand, within Psyr_4762 at 5637.651 kb on - strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.786 kb on + strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.787 kb on - strand, within Psyr_4762 at 5637.872 kb on + strand at 5637.872 kb on + strand at 5637.873 kb on - strand at 5637.887 kb on - strand at 5637.895 kb on - strand at 5637.958 kb on + strand at 5637.958 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 250 ug/ml remove 5,635,365 - -0.1 5,635,428 + +0.2 5,635,727 + +0.8 5,635,728 - -0.6 5,635,958 + Psyr_4760 0.68 +1.0 5,636,090 + -0.0 5,636,090 + +0.1 5,636,090 + +1.0 5,636,090 + -0.9 5,636,090 + +0.8 5,636,090 + +1.4 5,636,090 + +1.1 5,636,090 + +0.4 5,636,091 - -1.3 5,636,091 - -0.2 5,636,091 - -1.2 5,636,091 - -0.2 5,636,091 - -2.4 5,636,094 + +0.0 5,636,094 + +0.2 5,636,094 + +1.0 5,636,095 - -0.6 5,636,108 + -1.3 5,636,108 + -1.3 5,636,108 + -0.3 5,636,108 + -0.4 5,636,109 - -0.2 5,636,109 - -0.1 5,636,109 - +0.7 5,636,110 + -2.4 5,636,110 + +0.2 5,636,110 + +1.0 5,636,110 + -1.9 5,636,111 - -2.0 5,636,111 - -0.9 5,636,111 - +0.9 5,636,111 - +0.8 5,636,111 - +0.0 5,636,111 - -1.1 5,636,128 - +0.3 5,636,158 + -0.3 5,636,158 + +0.7 5,636,158 + +1.0 5,636,158 + -0.0 5,636,158 + -0.5 5,636,159 - -0.2 5,636,159 - -0.8 5,636,159 - -0.4 5,636,159 - -0.6 5,636,184 + -0.0 5,636,185 - -0.7 5,636,185 - +1.4 5,636,460 + Psyr_4761 0.37 +0.6 5,636,460 + Psyr_4761 0.37 -0.9 5,636,460 + Psyr_4761 0.37 -1.2 5,636,460 + Psyr_4761 0.37 -0.6 5,636,460 + Psyr_4761 0.37 -0.5 5,636,460 + Psyr_4761 0.37 +0.4 5,636,461 - Psyr_4761 0.37 -1.0 5,636,461 - Psyr_4761 0.37 -0.8 5,636,461 - Psyr_4761 0.37 -0.5 5,636,461 - Psyr_4761 0.37 -0.5 5,636,461 - Psyr_4761 0.37 -0.5 5,636,461 - Psyr_4761 0.37 +0.3 5,636,461 - Psyr_4761 0.37 -1.2 5,636,464 + Psyr_4761 0.37 -0.1 5,636,464 + Psyr_4761 0.37 +0.1 5,636,464 + Psyr_4761 0.37 -2.1 5,636,464 + Psyr_4761 0.37 -0.5 5,636,465 - Psyr_4761 0.37 -0.2 5,636,541 + Psyr_4761 0.47 +1.0 5,636,659 - Psyr_4761 0.61 -0.9 5,636,799 + Psyr_4761 0.78 +0.8 5,636,799 + Psyr_4761 0.78 -0.6 5,636,800 - Psyr_4761 0.78 +0.7 5,636,800 - Psyr_4761 0.78 -0.6 5,636,800 - Psyr_4761 0.78 -1.2 5,636,800 - Psyr_4761 0.78 +0.6 5,636,964 - +0.2 5,636,964 - -0.9 5,637,057 + +0.4 5,637,057 + -2.2 5,637,069 + -1.0 5,637,070 - -2.6 5,637,087 + +0.7 5,637,087 + -0.4 5,637,087 + -1.2 5,637,087 + -0.3 5,637,088 - -0.4 5,637,166 + Psyr_4762 0.17 +0.2 5,637,166 + Psyr_4762 0.17 -1.6 5,637,166 + Psyr_4762 0.17 -0.4 5,637,166 + Psyr_4762 0.17 -0.6 5,637,167 - Psyr_4762 0.17 -0.2 5,637,167 - Psyr_4762 0.17 -0.4 5,637,167 - -0.0 5,637,214 + Psyr_4762 0.22 +0.4 5,637,309 + Psyr_4762 0.33 +0.8 5,637,309 + Psyr_4762 0.33 -2.4 5,637,309 + Psyr_4762 0.33 -0.5 5,637,310 - Psyr_4762 0.33 -1.0 5,637,310 - Psyr_4762 0.33 -1.2 5,637,310 - Psyr_4762 0.33 -3.3 5,637,310 - Psyr_4762 0.33 -0.2 5,637,391 - Psyr_4762 0.43 +0.4 5,637,414 + Psyr_4762 0.45 +1.2 5,637,414 + Psyr_4762 0.45 +0.6 5,637,414 + Psyr_4762 0.45 +0.6 5,637,414 + Psyr_4762 0.45 +0.4 5,637,414 + Psyr_4762 0.45 -0.1 5,637,414 + Psyr_4762 0.45 -3.9 5,637,414 + Psyr_4762 0.45 +0.3 5,637,414 + Psyr_4762 0.45 +0.9 5,637,414 + Psyr_4762 0.45 -0.0 5,637,414 + Psyr_4762 0.45 +2.0 5,637,414 + Psyr_4762 0.45 +0.2 5,637,414 + Psyr_4762 0.45 +0.0 5,637,415 - Psyr_4762 0.46 +1.0 5,637,415 - Psyr_4762 0.46 -0.8 5,637,415 - Psyr_4762 0.46 -0.1 5,637,415 - Psyr_4762 0.46 -0.8 5,637,415 - Psyr_4762 0.46 +0.0 5,637,415 - Psyr_4762 0.46 +0.1 5,637,415 - Psyr_4762 0.46 +0.9 5,637,415 - Psyr_4762 0.46 -0.1 5,637,415 - Psyr_4762 0.46 -0.0 5,637,474 + Psyr_4762 0.52 +0.6 5,637,474 + Psyr_4762 0.52 +0.4 5,637,474 + Psyr_4762 0.52 +0.7 5,637,474 + Psyr_4762 0.52 -1.3 5,637,474 + Psyr_4762 0.52 +1.2 5,637,475 - Psyr_4762 0.52 -0.4 5,637,475 - Psyr_4762 0.52 +0.1 5,637,475 - Psyr_4762 0.52 -0.8 5,637,651 - Psyr_4762 0.73 -0.4 5,637,786 + Psyr_4762 0.88 +0.4 5,637,786 + Psyr_4762 0.88 +0.0 5,637,786 + Psyr_4762 0.88 -0.4 5,637,786 + Psyr_4762 0.88 -1.0 5,637,786 + Psyr_4762 0.88 +0.4 5,637,786 + Psyr_4762 0.88 +0.4 5,637,786 + Psyr_4762 0.88 +0.4 5,637,786 + Psyr_4762 0.88 -1.1 5,637,786 + Psyr_4762 0.88 -0.0 5,637,786 + Psyr_4762 0.88 +0.5 5,637,786 + Psyr_4762 0.88 +0.4 5,637,786 + Psyr_4762 0.88 -2.5 5,637,786 + Psyr_4762 0.88 -0.3 5,637,786 + Psyr_4762 0.88 +0.6 5,637,786 + Psyr_4762 0.88 -3.0 5,637,786 + Psyr_4762 0.88 +0.2 5,637,786 + Psyr_4762 0.88 +1.0 5,637,786 + Psyr_4762 0.88 +0.5 5,637,786 + Psyr_4762 0.88 +0.7 5,637,786 + Psyr_4762 0.88 -1.4 5,637,786 + Psyr_4762 0.88 -0.6 5,637,786 + Psyr_4762 0.88 -0.3 5,637,786 + Psyr_4762 0.88 -0.4 5,637,786 + Psyr_4762 0.88 -1.3 5,637,786 + Psyr_4762 0.88 -0.3 5,637,786 + Psyr_4762 0.88 +0.4 5,637,786 + Psyr_4762 0.88 -1.0 5,637,786 + Psyr_4762 0.88 -0.5 5,637,786 + Psyr_4762 0.88 +1.0 5,637,786 + Psyr_4762 0.88 -0.8 5,637,787 - Psyr_4762 0.88 -0.1 5,637,787 - Psyr_4762 0.88 +0.6 5,637,787 - Psyr_4762 0.88 -0.6 5,637,787 - Psyr_4762 0.88 -1.4 5,637,787 - Psyr_4762 0.88 +0.4 5,637,787 - Psyr_4762 0.88 -0.8 5,637,787 - Psyr_4762 0.88 -2.0 5,637,787 - Psyr_4762 0.88 +0.5 5,637,787 - Psyr_4762 0.88 -1.0 5,637,787 - Psyr_4762 0.88 -0.1 5,637,787 - Psyr_4762 0.88 -1.8 5,637,787 - Psyr_4762 0.88 -0.5 5,637,787 - Psyr_4762 0.88 -0.7 5,637,787 - Psyr_4762 0.88 -0.1 5,637,787 - Psyr_4762 0.88 +0.2 5,637,787 - Psyr_4762 0.88 +0.0 5,637,787 - Psyr_4762 0.88 -1.0 5,637,872 + +0.5 5,637,872 + -1.6 5,637,873 - +0.8 5,637,887 - -1.4 5,637,895 - -0.5 5,637,958 + +0.3 5,637,958 + -3.4
Or see this region's nucleotide sequence