Experiment: KB with Novobiocin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4734 and Psyr_4735 are separated by 445 nucleotides Psyr_4735 and Psyr_4736 overlap by 8 nucleotides
Psyr_4734: Psyr_4734 - transcriptional regulator, TetR family, at 5,612,941 to 5,613,534
_4734
Psyr_4735: Psyr_4735 - GTP-binding protein, HSR1-related protein, at 5,613,980 to 5,615,368
_4735
Psyr_4736: Psyr_4736 - conserved hypothetical protein, at 5,615,361 to 5,616,740
_4736
Position (kb) 5613
5614
5615
5616 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5612.981 kb on + strand at 5613.413 kb on - strand, within Psyr_4734 at 5613.571 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.762 kb on + strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.763 kb on - strand at 5613.912 kb on - strand at 5613.912 kb on - strand at 5614.527 kb on + strand, within Psyr_4735 at 5614.528 kb on - strand, within Psyr_4735 at 5614.956 kb on + strand, within Psyr_4735 at 5614.957 kb on - strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.992 kb on + strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5614.993 kb on - strand, within Psyr_4735 at 5615.178 kb on + strand, within Psyr_4735 at 5615.287 kb on + strand at 5615.287 kb on + strand at 5615.287 kb on + strand at 5615.288 kb on - strand at 5615.288 kb on - strand at 5615.288 kb on - strand at 5615.288 kb on - strand at 5615.317 kb on + strand at 5615.317 kb on + strand at 5615.654 kb on + strand, within Psyr_4736 at 5615.654 kb on + strand, within Psyr_4736 at 5615.724 kb on + strand, within Psyr_4736 at 5615.848 kb on + strand, within Psyr_4736 at 5616.350 kb on + strand, within Psyr_4736 at 5616.351 kb on - strand, within Psyr_4736
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 250 ug/ml remove 5,612,981 + -2.3 5,613,413 - Psyr_4734 0.79 -0.4 5,613,571 + -1.4 5,613,762 + +1.6 5,613,762 + -0.6 5,613,762 + -0.7 5,613,762 + +1.6 5,613,762 + -1.5 5,613,762 + +0.3 5,613,762 + +0.0 5,613,762 + +1.5 5,613,762 + +0.1 5,613,763 - -1.2 5,613,763 - -0.4 5,613,763 - +0.2 5,613,763 - +0.3 5,613,763 - +0.1 5,613,763 - -0.5 5,613,763 - -0.1 5,613,912 - +0.9 5,613,912 - +0.9 5,614,527 + Psyr_4735 0.39 -2.1 5,614,528 - Psyr_4735 0.39 -1.7 5,614,956 + Psyr_4735 0.70 -0.3 5,614,957 - Psyr_4735 0.70 +0.2 5,614,992 + Psyr_4735 0.73 -0.2 5,614,992 + Psyr_4735 0.73 -3.1 5,614,992 + Psyr_4735 0.73 +0.9 5,614,992 + Psyr_4735 0.73 -1.2 5,614,992 + Psyr_4735 0.73 -1.8 5,614,992 + Psyr_4735 0.73 -0.9 5,614,992 + Psyr_4735 0.73 -0.2 5,614,992 + Psyr_4735 0.73 -0.4 5,614,993 - Psyr_4735 0.73 -1.1 5,614,993 - Psyr_4735 0.73 +0.1 5,614,993 - Psyr_4735 0.73 +0.0 5,614,993 - Psyr_4735 0.73 +0.2 5,614,993 - Psyr_4735 0.73 -1.2 5,614,993 - Psyr_4735 0.73 +0.8 5,615,178 + Psyr_4735 0.86 -0.0 5,615,287 + -1.8 5,615,287 + -1.0 5,615,287 + -0.1 5,615,288 - -0.8 5,615,288 - -1.2 5,615,288 - +0.0 5,615,288 - -0.6 5,615,317 + -2.1 5,615,317 + -0.8 5,615,654 + Psyr_4736 0.21 -1.6 5,615,654 + Psyr_4736 0.21 -0.5 5,615,724 + Psyr_4736 0.26 -2.0 5,615,848 + Psyr_4736 0.35 -1.0 5,616,350 + Psyr_4736 0.72 -0.8 5,616,351 - Psyr_4736 0.72 +0.0
Or see this region's nucleotide sequence