Experiment: KB with Novobiocin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4590 and Psyr_4591 are separated by 3 nucleotides Psyr_4591 and Psyr_4592 overlap by 4 nucleotides
Psyr_4590: Psyr_4590 - Bacteriophage Mu P, at 5,449,796 to 5,450,923
_4590
Psyr_4591: Psyr_4591 - DNA circulation, N-terminal, at 5,450,927 to 5,452,339
_4591
Psyr_4592: Psyr_4592 - Phage tail tape measure protein TP901, core region, at 5,452,336 to 5,454,495
_4592
Position (kb) 5450
5451
5452
5453 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5449.953 kb on + strand, within Psyr_4590 at 5449.953 kb on + strand, within Psyr_4590 at 5449.954 kb on - strand, within Psyr_4590 at 5449.954 kb on - strand, within Psyr_4590 at 5449.987 kb on + strand, within Psyr_4590 at 5450.026 kb on + strand, within Psyr_4590 at 5450.026 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.073 kb on + strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.074 kb on - strand, within Psyr_4590 at 5450.192 kb on - strand, within Psyr_4590 at 5450.688 kb on + strand, within Psyr_4590 at 5450.688 kb on + strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.689 kb on - strand, within Psyr_4590 at 5450.806 kb on + strand, within Psyr_4590 at 5450.807 kb on - strand, within Psyr_4590 at 5450.807 kb on - strand, within Psyr_4590 at 5450.877 kb on + strand at 5450.877 kb on + strand at 5451.153 kb on + strand, within Psyr_4591 at 5451.154 kb on - strand, within Psyr_4591 at 5451.532 kb on + strand, within Psyr_4591 at 5451.533 kb on - strand, within Psyr_4591 at 5451.533 kb on - strand, within Psyr_4591 at 5451.533 kb on - strand, within Psyr_4591 at 5451.640 kb on + strand, within Psyr_4591 at 5451.640 kb on + strand, within Psyr_4591 at 5451.707 kb on - strand, within Psyr_4591 at 5451.771 kb on + strand, within Psyr_4591 at 5451.771 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.815 kb on + strand, within Psyr_4591 at 5451.847 kb on + strand, within Psyr_4591 at 5452.177 kb on + strand, within Psyr_4591 at 5452.212 kb on + strand at 5452.212 kb on + strand at 5452.212 kb on + strand at 5452.212 kb on + strand at 5452.213 kb on - strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.333 kb on + strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.334 kb on - strand at 5452.725 kb on + strand, within Psyr_4592 at 5452.725 kb on + strand, within Psyr_4592 at 5452.726 kb on - strand, within Psyr_4592 at 5452.762 kb on + strand, within Psyr_4592 at 5452.763 kb on - strand, within Psyr_4592 at 5452.763 kb on - strand, within Psyr_4592 at 5452.763 kb on - strand, within Psyr_4592 at 5453.113 kb on + strand, within Psyr_4592 at 5453.113 kb on + strand, within Psyr_4592 at 5453.113 kb on + strand, within Psyr_4592 at 5453.113 kb on + strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.114 kb on - strand, within Psyr_4592 at 5453.169 kb on - strand, within Psyr_4592 at 5453.169 kb on - strand, within Psyr_4592 at 5453.312 kb on - strand, within Psyr_4592
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 250 ug/ml remove 5,449,953 + Psyr_4590 0.14 +2.1 5,449,953 + Psyr_4590 0.14 -0.3 5,449,954 - Psyr_4590 0.14 +0.6 5,449,954 - Psyr_4590 0.14 +0.3 5,449,987 + Psyr_4590 0.17 +0.7 5,450,026 + Psyr_4590 0.20 -0.5 5,450,026 + Psyr_4590 0.20 -1.1 5,450,073 + Psyr_4590 0.25 +1.4 5,450,073 + Psyr_4590 0.25 +1.2 5,450,073 + Psyr_4590 0.25 +0.7 5,450,073 + Psyr_4590 0.25 +0.1 5,450,073 + Psyr_4590 0.25 +0.5 5,450,074 - Psyr_4590 0.25 +0.3 5,450,074 - Psyr_4590 0.25 +1.7 5,450,074 - Psyr_4590 0.25 -1.1 5,450,074 - Psyr_4590 0.25 -0.7 5,450,192 - Psyr_4590 0.35 -0.1 5,450,688 + Psyr_4590 0.79 +1.1 5,450,688 + Psyr_4590 0.79 +1.6 5,450,689 - Psyr_4590 0.79 -0.2 5,450,689 - Psyr_4590 0.79 +0.2 5,450,689 - Psyr_4590 0.79 +0.2 5,450,689 - Psyr_4590 0.79 -0.1 5,450,689 - Psyr_4590 0.79 +0.3 5,450,689 - Psyr_4590 0.79 -0.4 5,450,806 + Psyr_4590 0.90 +1.5 5,450,807 - Psyr_4590 0.90 +2.1 5,450,807 - Psyr_4590 0.90 +0.4 5,450,877 + +1.5 5,450,877 + +0.7 5,451,153 + Psyr_4591 0.16 +1.1 5,451,154 - Psyr_4591 0.16 +0.8 5,451,532 + Psyr_4591 0.43 +2.0 5,451,533 - Psyr_4591 0.43 -0.9 5,451,533 - Psyr_4591 0.43 +0.2 5,451,533 - Psyr_4591 0.43 -0.4 5,451,640 + Psyr_4591 0.50 +3.5 5,451,640 + Psyr_4591 0.50 +1.2 5,451,707 - Psyr_4591 0.55 +0.7 5,451,771 + Psyr_4591 0.60 +1.4 5,451,771 + Psyr_4591 0.60 +1.1 5,451,815 + Psyr_4591 0.63 +0.3 5,451,815 + Psyr_4591 0.63 +0.7 5,451,815 + Psyr_4591 0.63 +0.4 5,451,815 + Psyr_4591 0.63 +0.7 5,451,815 + Psyr_4591 0.63 +0.7 5,451,847 + Psyr_4591 0.65 -0.2 5,452,177 + Psyr_4591 0.88 -0.2 5,452,212 + +0.0 5,452,212 + -1.5 5,452,212 + +1.5 5,452,212 + +0.4 5,452,213 - +0.9 5,452,333 + -0.2 5,452,333 + +0.6 5,452,333 + +1.2 5,452,333 + -0.3 5,452,333 + -1.0 5,452,333 + +0.9 5,452,333 + +0.8 5,452,333 + +1.1 5,452,333 + +1.7 5,452,333 + +0.7 5,452,333 + -0.3 5,452,333 + +0.5 5,452,333 + -0.3 5,452,333 + -2.0 5,452,333 + +2.2 5,452,333 + +0.4 5,452,334 - +0.0 5,452,334 - +0.0 5,452,334 - -0.0 5,452,334 - -0.8 5,452,334 - -0.9 5,452,334 - +0.3 5,452,334 - -0.1 5,452,334 - -0.8 5,452,334 - +0.0 5,452,334 - -0.7 5,452,334 - -1.4 5,452,334 - -0.5 5,452,725 + Psyr_4592 0.18 +0.2 5,452,725 + Psyr_4592 0.18 +0.7 5,452,726 - Psyr_4592 0.18 -0.5 5,452,762 + Psyr_4592 0.20 +1.0 5,452,763 - Psyr_4592 0.20 +0.9 5,452,763 - Psyr_4592 0.20 +0.3 5,452,763 - Psyr_4592 0.20 -2.8 5,453,113 + Psyr_4592 0.36 -0.1 5,453,113 + Psyr_4592 0.36 +1.0 5,453,113 + Psyr_4592 0.36 +1.4 5,453,113 + Psyr_4592 0.36 -0.4 5,453,114 - Psyr_4592 0.36 -0.4 5,453,114 - Psyr_4592 0.36 -1.7 5,453,114 - Psyr_4592 0.36 +0.4 5,453,114 - Psyr_4592 0.36 +1.4 5,453,169 - Psyr_4592 0.39 -0.3 5,453,169 - Psyr_4592 0.39 +0.7 5,453,312 - Psyr_4592 0.45 +1.7
Or see this region's nucleotide sequence