Experiment: KB with Novobiocin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4567 and Psyr_4568 are separated by 62 nucleotides Psyr_4568 and Psyr_4569 are separated by 264 nucleotides
Psyr_4567: Psyr_4567 - Protein of unknown function UPF0075, at 5,431,616 to 5,432,710
_4567
Psyr_4568: Psyr_4568 - HesB/YadR/YfhF, at 5,432,773 to 5,433,123
_4568
Psyr_4569: Psyr_4569 - N-acetyl-gamma-glutamyl-phosphate reductase, at 5,433,388 to 5,434,422
_4569
Position (kb)
5432
5433
5434 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5431.909 kb on + strand, within Psyr_4567 at 5431.910 kb on - strand, within Psyr_4567 at 5431.910 kb on - strand, within Psyr_4567 at 5431.910 kb on - strand, within Psyr_4567 at 5432.181 kb on + strand, within Psyr_4567 at 5432.181 kb on + strand, within Psyr_4567 at 5432.182 kb on - strand, within Psyr_4567 at 5432.182 kb on - strand, within Psyr_4567 at 5432.182 kb on - strand, within Psyr_4567 at 5432.222 kb on + strand, within Psyr_4567 at 5432.222 kb on + strand, within Psyr_4567 at 5432.223 kb on - strand, within Psyr_4567 at 5432.324 kb on - strand, within Psyr_4567 at 5432.324 kb on - strand, within Psyr_4567 at 5432.545 kb on + strand, within Psyr_4567 at 5433.274 kb on + strand at 5433.274 kb on + strand at 5433.281 kb on + strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.282 kb on - strand at 5433.288 kb on + strand at 5433.288 kb on + strand at 5433.288 kb on + strand at 5433.288 kb on + strand at 5433.288 kb on + strand at 5433.288 kb on + strand at 5433.289 kb on - strand at 5433.295 kb on + strand at 5433.295 kb on + strand at 5433.295 kb on + strand at 5433.296 kb on - strand at 5433.296 kb on - strand at 5433.296 kb on - strand at 5433.296 kb on - strand at 5433.296 kb on - strand at 5433.296 kb on - strand at 5433.296 kb on - strand at 5433.302 kb on + strand at 5433.302 kb on + strand at 5433.302 kb on + strand at 5433.302 kb on + strand at 5433.303 kb on - strand at 5433.303 kb on - strand at 5433.309 kb on + strand at 5433.309 kb on + strand at 5433.309 kb on + strand at 5433.309 kb on + strand at 5433.309 kb on + strand at 5433.316 kb on + strand at 5433.316 kb on + strand at 5433.317 kb on - strand at 5433.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 250 ug/ml remove 5,431,909 + Psyr_4567 0.27 +1.8 5,431,910 - Psyr_4567 0.27 +3.0 5,431,910 - Psyr_4567 0.27 +1.2 5,431,910 - Psyr_4567 0.27 +0.7 5,432,181 + Psyr_4567 0.52 -0.1 5,432,181 + Psyr_4567 0.52 +1.7 5,432,182 - Psyr_4567 0.52 +2.0 5,432,182 - Psyr_4567 0.52 -1.7 5,432,182 - Psyr_4567 0.52 +1.2 5,432,222 + Psyr_4567 0.55 -0.4 5,432,222 + Psyr_4567 0.55 +1.4 5,432,223 - Psyr_4567 0.55 +0.9 5,432,324 - Psyr_4567 0.65 +1.8 5,432,324 - Psyr_4567 0.65 +0.2 5,432,545 + Psyr_4567 0.85 +1.9 5,433,274 + -0.8 5,433,274 + +0.9 5,433,281 + +1.2 5,433,282 - +0.1 5,433,282 - -0.1 5,433,282 - -2.1 5,433,282 - -1.2 5,433,282 - -0.4 5,433,282 - +0.8 5,433,282 - -0.7 5,433,282 - +0.1 5,433,282 - -2.4 5,433,288 + +0.3 5,433,288 + +1.9 5,433,288 + +2.4 5,433,288 + -0.0 5,433,288 + +0.6 5,433,288 + +0.6 5,433,289 - -0.8 5,433,295 + +0.1 5,433,295 + -1.3 5,433,295 + +0.9 5,433,296 - -0.6 5,433,296 - +0.1 5,433,296 - +3.3 5,433,296 - -0.7 5,433,296 - +0.2 5,433,296 - -0.1 5,433,296 - +0.3 5,433,302 + -0.5 5,433,302 + -0.2 5,433,302 + +0.5 5,433,302 + +0.5 5,433,303 - -0.7 5,433,303 - +0.4 5,433,309 + -1.3 5,433,309 + -0.9 5,433,309 + +0.8 5,433,309 + -0.4 5,433,309 + -0.8 5,433,316 + +1.0 5,433,316 + -0.5 5,433,317 - -1.0 5,433,317 - -0.8
Or see this region's nucleotide sequence