Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4003

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
4,765,390	-		Psyr_4001	0.42	-0.1
4,765,550	+				-1.0
4,765,679	+				+3.5
4,765,679	+				-0.2
4,765,679	+				-0.9
4,765,680	-				+0.7
4,765,680	-				+1.0
4,765,694	+				-1.3
4,765,729	+				+0.2
4,765,730	-				+1.1
4,765,740	-				+0.5
4,765,791	+		Psyr_4002	0.12	-1.7
4,765,791	+		Psyr_4002	0.12	+0.8
4,765,856	+		Psyr_4002	0.22	+2.1
4,765,856	+		Psyr_4002	0.22	+0.5
4,765,856	+		Psyr_4002	0.22	+2.6
4,765,857	-		Psyr_4002	0.22	+0.6
4,765,857	-		Psyr_4002	0.22	+1.1
4,765,857	-		Psyr_4002	0.22	+2.2
4,765,880	+		Psyr_4002	0.26	-1.9
4,765,880	+		Psyr_4002	0.26	-1.8
4,765,880	+		Psyr_4002	0.26	+0.1
4,765,880	+		Psyr_4002	0.26	+0.2
4,765,880	+		Psyr_4002	0.26	-0.2
4,765,881	-		Psyr_4002	0.26	+0.5
4,765,881	-		Psyr_4002	0.26	-1.8
4,765,881	-		Psyr_4002	0.26	+0.8
4,765,933	+		Psyr_4002	0.34	-1.2
4,765,933	+		Psyr_4002	0.34	-1.3
4,765,933	+		Psyr_4002	0.34	-1.8
4,765,933	+		Psyr_4002	0.34	+1.9
4,765,937	-		Psyr_4002	0.35	+0.4
4,766,092	-		Psyr_4002	0.60	+0.1
4,766,238	-		Psyr_4002	0.83	+1.5
4,766,238	-		Psyr_4002	0.83	+0.8
4,766,288	+				-2.3
4,766,288	+				-2.1
4,766,515	+		Psyr_4003	0.72	-1.1
4,766,515	+		Psyr_4003	0.72	-1.2
4,766,515	+		Psyr_4003	0.72	-1.5
4,766,517	+		Psyr_4003	0.73	-0.9
4,766,517	+		Psyr_4003	0.73	-0.7
4,766,517	+		Psyr_4003	0.73	-0.5
4,766,517	+		Psyr_4003	0.73	-2.3
4,766,517	+		Psyr_4003	0.73	+1.1
4,766,517	+		Psyr_4003	0.73	-3.8
4,766,517	+		Psyr_4003	0.73	-1.2
4,766,518	-		Psyr_4003	0.73	+0.7
4,766,565	+				+0.1
4,766,565	+				-1.9
4,766,565	+				-0.0
4,766,565	+				-0.2
4,766,566	-				+1.3
4,766,566	-				-0.3
4,766,566	-				+0.6
4,766,566	-				+0.8
4,766,566	-				+0.7
4,766,600	+				-0.0
4,766,600	+				-0.6
4,766,620	-				+0.5
4,766,693	-				-0.5
4,766,693	-				+1.8
4,766,693	-				+3.4
4,766,699	+				-0.5
4,766,699	+				-2.0
4,766,700	-				+0.1
4,766,733	+				-0.2
4,766,733	+				-1.7
4,766,734	-				+1.4
4,766,757	-				+0.1
4,766,804	+				-0.1
4,766,805	-				-0.1
4,766,805	-				+1.5
4,766,805	-				+1.5
4,766,807	-				+0.7
4,766,807	-				+0.5
4,766,822	-				-0.7
4,766,851	+				-1.7
4,766,851	+				-1.8
4,766,852	-				-0.3
4,766,852	-				+0.7
4,766,865	+				+0.6
4,766,865	+				+0.5
4,766,865	+				+0.5
4,766,865	+				-0.1
4,766,866	-				+0.9
4,766,866	-				+0.5
4,766,866	-				+0.5
4,766,968	-				+1.2
4,766,984	-				+0.6
4,767,055	+				-2.6
4,767,186	+				+0.1
4,767,187	-				-2.7
4,767,187	-				+0.8
4,767,209	+		Psyr_4004	0.11	-0.3
4,767,209	+		Psyr_4004	0.11	-1.8
4,767,209	+		Psyr_4004	0.11	+0.6
4,767,209	+		Psyr_4004	0.11	-0.6
4,767,210	-		Psyr_4004	0.11	+0.9
4,767,210	-		Psyr_4004	0.11	+2.5
4,767,210	-		Psyr_4004	0.11	+0.2
4,767,210	-		Psyr_4004	0.11	+0.9
4,767,461	+		Psyr_4004	0.28	+0.0
4,767,462	-		Psyr_4004	0.28	+0.0
4,767,462	-		Psyr_4004	0.28	+0.4
4,767,476	+		Psyr_4004	0.29	-0.4
4,767,476	+		Psyr_4004	0.29	+2.1
4,767,476	+		Psyr_4004	0.29	+0.8
4,767,476	+		Psyr_4004	0.29	+1.1
4,767,476	+		Psyr_4004	0.29	+1.1
4,767,476	+		Psyr_4004	0.29	-3.2
4,767,476	+		Psyr_4004	0.29	+1.2
4,767,476	+		Psyr_4004	0.29	+0.8
4,767,477	-		Psyr_4004	0.29	+2.5
4,767,477	-		Psyr_4004	0.29	+1.1
4,767,527	+		Psyr_4004	0.32	-1.0
4,767,527	+		Psyr_4004	0.32	-1.1
4,767,528	-		Psyr_4004	0.32	+1.1