Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3729

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
4,436,598	+		Psyr_3727	0.83	-0.9
4,436,598	+		Psyr_3727	0.83	+0.5
4,436,599	-		Psyr_3727	0.84	+0.5
4,436,599	-		Psyr_3727	0.84	+0.3
4,436,619	+				-0.5
4,436,619	+				-1.5
4,436,620	-				+1.9
4,436,682	-				+0.5
4,436,820	+				-1.8
4,436,838	-				-1.0
4,436,838	-				-1.6
4,436,838	-				-2.3
4,436,840	-				-1.3
4,436,871	-				-0.8
4,436,922	+				-4.6
4,436,922	+				-1.0
4,436,923	-				-1.0
4,436,928	+				-2.6
4,436,929	-				-3.6
4,436,929	-				+2.5
4,436,948	-				-1.7
4,436,977	+				-1.9
4,436,977	+				-2.9
4,436,977	+				-1.5
4,436,977	+				-2.1
4,436,977	+				-4.5
4,436,978	-				-3.5
4,436,978	-				-4.7
4,436,978	-				-3.7
4,436,978	-				-2.1
4,436,978	-				-1.5
4,436,978	-				-3.3
4,436,978	-				-2.9
4,436,981	+				+1.8
4,436,981	+				-2.4
4,436,981	+				-1.8
4,436,982	-				-0.6
4,436,982	-				-1.5
4,436,982	-				-2.8
4,437,097	-				-2.3
4,437,143	+		Psyr_3728	0.11	-1.6
4,437,143	+		Psyr_3728	0.11	-0.5
4,437,171	+		Psyr_3728	0.19	-0.7
4,437,171	+		Psyr_3728	0.19	-3.8
4,437,171	+		Psyr_3728	0.19	-2.6
4,437,269	+		Psyr_3728	0.45	-3.0
4,437,269	+		Psyr_3728	0.45	-3.6
4,437,270	-		Psyr_3728	0.46	-0.4
4,437,273	+		Psyr_3728	0.46	+1.5
4,437,273	+		Psyr_3728	0.46	-0.6
4,437,274	-		Psyr_3728	0.47	-0.9
4,437,274	-		Psyr_3728	0.47	-0.9
4,437,276	+		Psyr_3728	0.47	-3.2
4,437,276	+		Psyr_3728	0.47	-0.3
4,437,277	-		Psyr_3728	0.47	+0.0
4,437,277	-		Psyr_3728	0.47	-1.9
4,437,280	+		Psyr_3728	0.48	-1.3
4,437,280	+		Psyr_3728	0.48	-0.2
4,437,281	-		Psyr_3728	0.49	-1.3
4,437,365	+		Psyr_3728	0.71	-1.6
4,437,365	+		Psyr_3728	0.71	+0.5
4,437,503	+				-1.5
4,437,540	+				-1.5
4,437,540	+				-0.3
4,437,541	-				-1.5
4,437,554	+				-0.7
4,437,663	-		Psyr_3729	0.31	-1.9
4,437,705	+		Psyr_3729	0.43	+0.7
4,437,705	+		Psyr_3729	0.43	+1.3
4,437,705	+		Psyr_3729	0.43	+0.4
4,437,705	+		Psyr_3729	0.43	+0.2
4,437,706	-		Psyr_3729	0.43	+0.5
4,437,706	-		Psyr_3729	0.43	-1.7
4,437,706	-		Psyr_3729	0.43	-3.5
4,437,709	+		Psyr_3729	0.44	+1.1
4,437,710	-		Psyr_3729	0.44	-0.2
4,437,710	-		Psyr_3729	0.44	-1.5
4,437,783	-		Psyr_3729	0.64	+2.9
4,437,834	-		Psyr_3729	0.79	-1.8
4,437,841	+		Psyr_3729	0.81	-0.9
4,437,842	-		Psyr_3729	0.81	-0.9
4,437,861	+		Psyr_3729	0.86	-1.2
4,437,884	+				-1.5
4,438,219	-				-0.3
4,438,260	+				-1.0
4,438,261	-				-0.0
4,438,447	+		Psyr_3731	0.16	-0.1
4,438,448	-		Psyr_3731	0.16	+0.0
4,438,448	-		Psyr_3731	0.16	-0.3
4,438,476	+		Psyr_3731	0.18	+0.3
4,438,556	-		Psyr_3731	0.24	-1.8
4,438,594	-		Psyr_3731	0.27	-0.6
4,438,618	+		Psyr_3731	0.29	-0.2
4,438,618	+		Psyr_3731	0.29	-2.8
4,438,618	+		Psyr_3731	0.29	-3.5
4,438,618	+		Psyr_3731	0.29	+0.2
4,438,618	+		Psyr_3731	0.29	+1.2
4,438,619	-		Psyr_3731	0.29	-1.1
4,438,619	-		Psyr_3731	0.29	-1.0
4,438,619	-		Psyr_3731	0.29	+0.5
4,438,619	-		Psyr_3731	0.29	+1.2
4,438,619	-		Psyr_3731	0.29	-0.2
4,438,619	-		Psyr_3731	0.29	-0.5
4,438,654	+		Psyr_3731	0.31	-0.3
4,438,691	-		Psyr_3731	0.34	-1.8
4,438,691	-		Psyr_3731	0.34	-1.3
4,438,691	-		Psyr_3731	0.34	+1.3
4,438,691	-		Psyr_3731	0.34	+0.5
4,438,705	+		Psyr_3731	0.35	-1.8
4,438,705	+		Psyr_3731	0.35	-2.2
4,438,705	+		Psyr_3731	0.35	-1.0
4,438,706	-		Psyr_3731	0.35	-1.2