Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3707

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
4,392,413	+		Psyr_3705	0.83	-1.1
4,392,413	+		Psyr_3705	0.83	-1.3
4,392,413	+		Psyr_3705	0.83	-0.1
4,392,413	+		Psyr_3705	0.83	-0.2
4,392,413	+		Psyr_3705	0.83	+0.7
4,392,413	+		Psyr_3705	0.83	-1.0
4,392,414	-		Psyr_3705	0.84	+1.0
4,392,414	-		Psyr_3705	0.84	+1.0
4,392,414	-		Psyr_3705	0.84	-4.0
4,392,414	-		Psyr_3705	0.84	-0.8
4,392,414	-		Psyr_3705	0.84	-1.2
4,392,414	-		Psyr_3705	0.84	-0.0
4,392,414	-		Psyr_3705	0.84	-0.4
4,392,551	+				+0.2
4,392,551	+				-0.4
4,392,552	-				+1.0
4,392,552	-				-0.4
4,392,552	-				+0.6
4,392,552	-				-0.7
4,392,552	-				+1.6
4,392,617	+				-0.8
4,392,618	-				-1.6
4,392,618	-				+0.3
4,392,621	+				-0.4
4,392,621	+				+0.3
4,392,621	+				+0.6
4,392,621	+				+0.8
4,392,621	+				-0.4
4,392,622	-				-0.2
4,392,622	-				-2.0
4,392,622	-				-1.4
4,392,622	-				-0.2
4,392,622	-				-2.4
4,392,701	-				+0.4
4,392,717	-				-0.6
4,392,717	-				-0.2
4,392,717	-				+1.6
4,392,717	-				-1.9
4,392,717	-				-0.9
4,392,717	-				-1.4
4,392,739	-				+1.2
4,392,906	+		Psyr_3706	0.33	-0.7
4,392,906	+		Psyr_3706	0.33	-1.3
4,392,906	+		Psyr_3706	0.33	+1.0
4,392,907	-		Psyr_3706	0.33	-1.5
4,392,907	-		Psyr_3706	0.33	+0.6
4,392,907	-		Psyr_3706	0.33	+1.4
4,392,907	-		Psyr_3706	0.33	-0.9
4,392,907	-		Psyr_3706	0.33	-0.8
4,393,038	+		Psyr_3706	0.59	-0.7
4,393,039	-		Psyr_3706	0.60	+0.2
4,393,068	+		Psyr_3706	0.65	+1.6
4,393,069	-		Psyr_3706	0.66	+0.2
4,393,069	-		Psyr_3706	0.66	-0.8
4,393,098	+		Psyr_3706	0.72	-0.0
4,393,098	+		Psyr_3706	0.72	+0.9
4,393,104	+		Psyr_3706	0.73	+0.6
4,393,104	+		Psyr_3706	0.73	+0.7
4,393,105	-		Psyr_3706	0.73	+1.3
4,393,236	+				+1.2
4,393,319	+				-1.4
4,393,325	+				+0.7
4,393,326	-				-0.1
4,393,729	+		Psyr_3707	0.31	-2.9
4,393,729	+		Psyr_3707	0.31	-2.4
4,393,729	+		Psyr_3707	0.31	-2.0
4,393,729	+		Psyr_3707	0.31	+1.9
4,393,729	+		Psyr_3707	0.31	+2.1
4,393,739	+		Psyr_3707	0.32	-0.8
4,393,760	-		Psyr_3707	0.34	-0.9
4,393,856	+		Psyr_3707	0.41	+0.6
4,393,857	-		Psyr_3707	0.41	+0.8
4,393,857	-		Psyr_3707	0.41	-1.1
4,393,888	+		Psyr_3707	0.43	-1.4
4,393,888	+		Psyr_3707	0.43	+0.6
4,393,889	-		Psyr_3707	0.43	-1.4
4,393,941	+		Psyr_3707	0.47	+0.3
4,393,972	+		Psyr_3707	0.49	+0.6
4,393,972	+		Psyr_3707	0.49	+0.6
4,393,972	+		Psyr_3707	0.49	-2.1
4,393,972	+		Psyr_3707	0.49	+0.0
4,393,972	+		Psyr_3707	0.49	-3.1
4,393,972	+		Psyr_3707	0.49	-0.2
4,393,973	-		Psyr_3707	0.49	+0.4
4,394,267	+		Psyr_3707	0.71	+0.9
4,394,294	-		Psyr_3707	0.73	-0.6
4,394,294	-		Psyr_3707	0.73	-0.2
4,394,413	+		Psyr_3707	0.82	+1.9
4,394,413	+		Psyr_3707	0.82	+0.6
4,394,414	-		Psyr_3707	0.82	+0.2
4,394,635	+				+1.1
4,394,636	-				-3.7
4,394,636	-				+0.1
4,394,636	-				+0.9
4,394,711	+				-0.4
4,394,712	-				+0.9
4,394,712	-				-1.4
4,394,713	+				+0.3
4,394,714	-				-1.8
4,394,714	-				-1.7
4,394,782	+				+1.8
4,394,782	+				+0.2
4,394,782	+				-0.6
4,394,782	+				+2.2
4,394,783	-				+1.3
4,394,783	-				+0.1
4,394,783	-				+0.4
4,394,783	-				-0.2
4,394,783	-				+0.3
4,394,783	-				+0.2
4,394,783	-				+1.8
4,394,786	+				+1.1
4,394,787	-				-1.0
4,394,833	+				+0.5
4,394,833	+				-0.4
4,394,834	-				-0.0
4,394,834	-				+0.6
4,394,834	-				+0.9
4,394,857	-				-0.9
4,394,896	-				+0.6
4,395,028	+				-0.0
4,395,028	+				-0.6
4,395,028	+				-1.8
4,395,029	-				-0.8
4,395,029	-				-1.8
4,395,029	-				+0.6
4,395,372	+		Psyr_3708	0.24	-0.1
4,395,620	-		Psyr_3708	0.42	+0.3