Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3694

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
4,378,679	-				-1.9
4,378,679	-				-2.3
4,378,679	-				+1.4
4,378,745	+				+1.1
4,378,746	-				-0.9
4,378,749	+				+0.8
4,378,750	-				+1.9
4,378,762	-				-0.3
4,378,774	-				-0.3
4,378,844	+				-1.6
4,378,844	+				-1.9
4,378,844	+				+1.2
4,378,844	+				+0.7
4,378,845	-				-0.9
4,378,845	-				-0.5
4,378,847	+				-0.6
4,378,847	+				+0.8
4,378,847	+				+0.6
4,378,847	+				+0.7
4,378,847	+				+0.1
4,378,847	+				-0.3
4,378,848	-				-1.0
4,378,848	-				-0.1
4,378,848	-				+0.6
4,378,848	-				-1.2
4,378,848	-				+0.4
4,378,848	-				+0.2
4,378,848	-				+0.9
4,378,850	+				-0.7
4,378,850	+				+0.4
4,378,850	+				-1.4
4,378,850	+				+0.5
4,378,850	+				+0.2
4,378,850	+				-1.0
4,378,850	+				+0.3
4,378,850	+				-1.0
4,378,851	-				+0.4
4,378,851	-				+1.1
4,378,851	-				-1.9
4,378,851	-				+0.3
4,378,851	-				-0.3
4,378,851	-				-0.6
4,378,851	-				+0.4
4,378,851	-				+0.6
4,378,865	+				-0.3
4,378,865	+				-0.4
4,378,866	-				+1.9
4,378,986	+		Psyr_3692	0.75	+1.8
4,378,987	-		Psyr_3692	0.76	+0.0
4,378,988	+		Psyr_3692	0.76	-0.2
4,379,110	+				-0.3
4,379,137	+				-2.4
4,379,356	+		Psyr_3693	0.46	+1.0
4,379,356	+		Psyr_3693	0.46	-0.2
4,379,356	+		Psyr_3693	0.46	-1.6
4,379,357	-		Psyr_3693	0.46	+1.9
4,379,357	-		Psyr_3693	0.46	-1.8
4,379,357	-		Psyr_3693	0.46	+0.2
4,379,357	-		Psyr_3693	0.46	-0.4
4,379,357	-		Psyr_3693	0.46	+0.8
4,379,357	-		Psyr_3693	0.46	-0.8
4,379,359	+		Psyr_3693	0.46	+1.1
4,379,359	+		Psyr_3693	0.46	+1.7
4,379,360	-		Psyr_3693	0.46	+1.1
4,379,360	-		Psyr_3693	0.46	+1.0
4,379,653	+				-0.2
4,379,654	-				+0.3
4,379,661	+				-2.1
4,379,661	+				+0.5
4,379,661	+				-2.4
4,379,661	+				+1.6
4,379,661	+				-2.0
4,379,661	+				+1.1
4,379,661	+				-0.8
4,379,661	+				-0.1
4,379,661	+				-0.9
4,379,661	+				+0.9
4,379,661	+				-0.4
4,379,661	+				+0.0
4,379,662	-				+0.1
4,379,662	-				-0.3
4,379,662	-				+0.6
4,379,662	-				-0.1
4,379,662	-				-2.0
4,379,662	-				-0.9
4,379,662	-				+0.6
4,379,662	-				+0.8
4,379,662	-				-0.4
4,379,663	+				-1.3
4,379,663	+				-0.9
4,379,663	+				-0.8
4,379,664	-				-0.3
4,379,664	-				-0.3
4,379,763	-		Psyr_3694	0.10	-1.0
4,380,307	+		Psyr_3694	0.75	-2.0
4,380,307	+		Psyr_3694	0.75	-1.8
4,380,307	+		Psyr_3694	0.75	-1.8
4,380,307	+		Psyr_3694	0.75	-1.4
4,380,307	+		Psyr_3694	0.75	-1.2
4,380,308	-		Psyr_3694	0.75	-0.6
4,380,308	-		Psyr_3694	0.75	-0.4
4,380,391	+		Psyr_3694	0.85	-1.8
4,380,508	+				+0.8
4,380,508	+				+1.3
4,380,508	+				+1.2
4,380,508	+				-0.0
4,380,508	+				+0.2
4,380,508	+				-0.7
4,380,508	+				-1.2
4,380,508	+				+0.6
4,380,508	+				-0.4
4,380,508	+				+0.6
4,380,508	+				+1.6
4,380,508	+				+1.4
4,380,509	-				+0.4
4,380,509	-				-0.2
4,380,509	-				-2.1
4,380,509	-				-0.2
4,380,509	-				-0.4
4,380,509	-				+0.7
4,380,509	-				+1.6
4,380,509	-				+0.2
4,380,509	-				-0.2
4,380,509	-				-1.0
4,380,509	-				-2.4
4,380,509	-				-0.8
4,380,512	+				-0.9
4,380,512	+				-0.3
4,380,512	+				-1.0
4,380,512	+				-0.0
4,380,512	+				+1.0
4,380,513	-				+0.3
4,380,513	-				+1.6
4,380,513	-				-0.2
4,380,513	-				+0.5
4,380,513	-				+0.4
4,380,570	-				-0.0
4,380,570	-				+0.3
4,380,592	-				-0.3
4,380,610	+				-0.4
4,380,610	+				-2.2
4,380,610	+				-3.5
4,380,611	-				-0.2
4,380,611	-				-0.1
4,380,611	-				+0.6
4,380,611	-				+0.7
4,380,624	+				-1.0
4,380,624	+				-2.2
4,380,624	+				-2.6
4,380,625	-				-0.8
4,380,625	-				-0.0
4,380,626	+				+0.2
4,380,626	+				-2.2
4,380,626	+				-0.2
4,380,626	+				-0.1
4,380,626	+				-1.0
4,380,626	+				-0.1
4,380,626	+				-1.2
4,380,626	+				-1.2
4,380,626	+				-1.4
4,380,627	-				-2.7
4,380,627	-				-0.4
4,380,627	-				+0.7
4,380,627	-				-0.8
4,380,627	-				-0.8
4,380,627	-				-1.0
4,380,627	-				-1.0
4,380,627	-				-2.6
4,380,627	-				-0.7
4,380,627	-				-2.6
4,380,627	-				-0.2
4,380,627	-				-0.6
4,380,627	-				+0.6
4,380,631	+				-0.0
4,380,631	+				-2.4
4,380,631	+				-0.7
4,380,631	+				-0.9
4,380,631	+				+0.6
4,380,631	+				+0.2
4,380,631	+				-0.0
4,380,633	+				-0.9
4,380,633	+				-0.8
4,380,633	+				-0.6
4,380,633	+				-1.9
4,380,634	-				-0.5
4,380,634	-				-1.5
4,380,634	-				-0.1
4,380,634	-				-0.6
4,380,634	-				+1.0
4,380,634	-				+1.7
4,380,634	-				+1.4
4,380,634	-				+1.9
4,380,634	-				-0.7
4,380,634	-				-0.4
4,380,634	-				+0.3
4,380,783	-				+1.9
4,380,856	+				-0.4
4,381,004	+		Psyr_3695	0.16	+0.3
4,381,004	+		Psyr_3695	0.16	-1.2
4,381,004	+		Psyr_3695	0.16	+0.7
4,381,005	-		Psyr_3695	0.16	-0.3
4,381,007	-		Psyr_3695	0.16	+0.8
4,381,007	-		Psyr_3695	0.16	+0.3
4,381,411	+		Psyr_3695	0.34	+0.2
4,381,412	-		Psyr_3695	0.34	-2.0
4,381,412	-		Psyr_3695	0.34	+1.8
4,381,412	-		Psyr_3695	0.34	-2.1
4,381,498	+		Psyr_3695	0.38	+0.7
4,381,498	+		Psyr_3695	0.38	-1.4
4,381,498	+		Psyr_3695	0.38	-1.0
4,381,498	+		Psyr_3695	0.38	-1.4
4,381,499	-		Psyr_3695	0.38	+1.6
4,381,499	-		Psyr_3695	0.38	-0.3
4,381,499	-		Psyr_3695	0.38	+0.6
4,381,499	-		Psyr_3695	0.38	-0.9