Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3254

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,898,079	-		Psyr_3252	0.78	-0.9
3,898,316	+		Psyr_3252	0.86	-2.1
3,898,316	+		Psyr_3252	0.86	-0.2
3,898,316	+		Psyr_3252	0.86	+1.7
3,898,317	-		Psyr_3252	0.86	+0.8
3,898,317	-		Psyr_3252	0.86	-2.9
3,898,397	+		Psyr_3252	0.89	-2.1
3,898,397	+		Psyr_3252	0.89	-0.8
3,898,397	+		Psyr_3252	0.89	+1.3
3,898,397	+		Psyr_3252	0.89	-0.8
3,898,397	+		Psyr_3252	0.89	-0.2
3,898,397	+		Psyr_3252	0.89	-0.3
3,898,397	+		Psyr_3252	0.89	-0.4
3,898,397	+		Psyr_3252	0.89	+1.4
3,898,397	+		Psyr_3252	0.89	-1.3
3,898,397	+		Psyr_3252	0.89	-1.3
3,898,397	+		Psyr_3252	0.89	+0.3
3,898,398	-		Psyr_3252	0.89	+2.9
3,898,398	-		Psyr_3252	0.89	+0.0
3,898,398	-		Psyr_3252	0.89	+0.8
3,898,398	-		Psyr_3252	0.89	-0.2
3,898,398	-		Psyr_3252	0.89	+0.8
3,898,398	-		Psyr_3252	0.89	-0.6
3,898,398	-		Psyr_3252	0.89	+1.4
3,898,398	-		Psyr_3252	0.89	+0.3
3,898,398	-		Psyr_3252	0.89	-0.7
3,898,398	-		Psyr_3252	0.89	-0.5
3,898,450	-				+0.7
3,898,473	+				+0.4
3,898,607	+				-0.9
3,898,608	-				-2.8
3,898,797	+		Psyr_3253	0.21	-0.7
3,898,797	+		Psyr_3253	0.21	+1.7
3,898,797	+		Psyr_3253	0.21	+0.5
3,898,798	-		Psyr_3253	0.21	+0.1
3,898,927	+		Psyr_3253	0.58	-0.5
3,898,927	+		Psyr_3253	0.58	-0.5
3,898,927	+		Psyr_3253	0.58	-2.2
3,898,928	-		Psyr_3253	0.59	+0.7
3,898,928	-		Psyr_3253	0.59	-0.6
3,898,928	-		Psyr_3253	0.59	-0.5
3,899,045	+				-0.7
3,899,045	+				-0.5
3,899,045	+				-1.7
3,899,045	+				+0.4
3,899,045	+				-1.9
3,899,046	-				-0.9
3,899,046	-				+0.1
3,899,046	-				+1.0
3,899,046	-				+0.3
3,899,265	+		Psyr_3254	0.12	+0.5
3,899,266	-		Psyr_3254	0.12	+0.2
3,899,266	-		Psyr_3254	0.12	-0.1
3,899,445	+		Psyr_3254	0.22	-1.3
3,899,497	+		Psyr_3254	0.26	+0.7
3,899,498	-		Psyr_3254	0.26	-0.2
3,899,498	-		Psyr_3254	0.26	+0.3
3,899,568	+		Psyr_3254	0.30	-0.1
3,899,568	+		Psyr_3254	0.30	-0.6
3,899,568	+		Psyr_3254	0.30	-0.3
3,899,568	+		Psyr_3254	0.30	-1.0
3,899,568	+		Psyr_3254	0.30	-0.3
3,899,569	-		Psyr_3254	0.30	-0.1
3,899,847	+		Psyr_3254	0.46	-0.3
3,899,847	+		Psyr_3254	0.46	-2.3
3,899,847	+		Psyr_3254	0.46	+4.0
3,899,847	+		Psyr_3254	0.46	-1.3
3,899,847	+		Psyr_3254	0.46	+1.0
3,899,848	-		Psyr_3254	0.46	-0.5
3,899,848	-		Psyr_3254	0.46	-1.3
3,899,848	-		Psyr_3254	0.46	+0.2
3,899,928	+		Psyr_3254	0.51	-0.1
3,899,928	+		Psyr_3254	0.51	-1.5
3,899,929	-		Psyr_3254	0.51	-0.9
3,900,010	+		Psyr_3254	0.56	-0.0
3,900,010	+		Psyr_3254	0.56	-0.9
3,900,010	+		Psyr_3254	0.56	+3.5
3,900,011	-		Psyr_3254	0.56	-0.6
3,900,084	+		Psyr_3254	0.60	+0.8
3,900,084	+		Psyr_3254	0.60	-3.0
3,900,084	+		Psyr_3254	0.60	+2.6
3,900,084	+		Psyr_3254	0.60	+0.3
3,900,084	+		Psyr_3254	0.60	-1.5
3,900,084	+		Psyr_3254	0.60	-2.5
3,900,084	+		Psyr_3254	0.60	+1.0
3,900,084	+		Psyr_3254	0.60	-1.5
3,900,084	+		Psyr_3254	0.60	-0.6
3,900,084	+		Psyr_3254	0.60	-0.6
3,900,084	+		Psyr_3254	0.60	-0.5
3,900,085	-		Psyr_3254	0.60	-0.5
3,900,085	-		Psyr_3254	0.60	-0.1
3,900,085	-		Psyr_3254	0.60	+0.2
3,900,085	-		Psyr_3254	0.60	-0.9
3,900,085	-		Psyr_3254	0.60	+1.0
3,900,085	-		Psyr_3254	0.60	-0.8
3,900,085	-		Psyr_3254	0.60	-0.4
3,900,085	-		Psyr_3254	0.60	-0.6
3,900,085	-		Psyr_3254	0.60	+2.6
3,900,087	-		Psyr_3254	0.60	-0.6
3,900,087	-		Psyr_3254	0.60	-0.2
3,900,177	+		Psyr_3254	0.66	-2.6
3,900,184	+		Psyr_3254	0.66	-0.6
3,900,184	+		Psyr_3254	0.66	+0.1
3,900,184	+		Psyr_3254	0.66	-0.2
3,900,184	+		Psyr_3254	0.66	-1.1
3,900,185	-		Psyr_3254	0.66	+0.4
3,900,185	-		Psyr_3254	0.66	-0.1
3,900,185	-		Psyr_3254	0.66	+0.9
3,900,185	-		Psyr_3254	0.66	-1.9
3,900,185	-		Psyr_3254	0.66	-1.5
3,900,675	+				-0.7
3,900,675	+				-0.2
3,900,675	+				+0.3
3,900,675	+				+0.1
3,900,675	+				+1.5
3,900,676	-				-1.8
3,900,676	-				-1.6
3,900,676	-				-3.0
3,900,676	-				-1.0
3,900,907	+		Psyr_3255	0.32	-1.3
3,900,908	-		Psyr_3255	0.33	+0.4
3,900,908	-		Psyr_3255	0.33	+0.1
3,900,939	+		Psyr_3255	0.39	-1.6
3,900,940	-		Psyr_3255	0.39	-0.5
3,901,095	+		Psyr_3255	0.71	-1.6
3,901,205	+				-0.5
3,901,205	+				-0.6
3,901,205	+				-1.2
3,901,206	-				+0.1
3,901,206	-				-0.3
3,901,206	-				+1.7
3,901,358	-		Psyr_3256	0.44	+0.9
3,901,358	-		Psyr_3256	0.44	-1.1
3,901,363	+		Psyr_3256	0.46	+0.2
3,901,363	+		Psyr_3256	0.46	+0.1
3,901,364	-		Psyr_3256	0.47	-0.7
3,901,368	+		Psyr_3256	0.48	+1.2
3,901,420	+		Psyr_3256	0.67	-1.6
3,901,420	+		Psyr_3256	0.67	-0.1
3,901,420	+		Psyr_3256	0.67	+0.8
3,901,420	+		Psyr_3256	0.67	+0.1
3,901,421	-		Psyr_3256	0.67	-3.3
3,901,421	-		Psyr_3256	0.67	+0.4
3,901,526	+				-0.7
3,901,527	-				-2.1
3,901,527	-				-1.9
3,901,549	+		Psyr_3257	0.10	-1.5
3,901,701	+		Psyr_3257	0.50	-0.9
3,901,701	+		Psyr_3257	0.50	-2.1
3,901,701	+		Psyr_3257	0.50	-0.6
3,901,702	-		Psyr_3257	0.51	+0.0
3,901,702	-		Psyr_3257	0.51	-0.4
3,901,702	-		Psyr_3257	0.51	-0.4