Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3211

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,843,206	-		Psyr_3210	0.42	-2.4
3,843,311	+		Psyr_3210	0.51	-1.3
3,843,311	+		Psyr_3210	0.51	-0.0
3,843,311	+		Psyr_3210	0.51	-2.3
3,843,312	-		Psyr_3210	0.51	+0.6
3,843,320	+		Psyr_3210	0.52	-2.4
3,843,320	+		Psyr_3210	0.52	-2.3
3,843,321	-		Psyr_3210	0.52	-0.6
3,843,392	+		Psyr_3210	0.59	-1.6
3,843,554	+		Psyr_3210	0.74	+0.3
3,843,555	-		Psyr_3210	0.74	+1.3
3,843,555	-		Psyr_3210	0.74	-0.6
3,843,555	-		Psyr_3210	0.74	-0.9
3,843,730	+				+0.1
3,843,730	+				-2.1
3,843,730	+				-0.1
3,843,731	-				-3.2
3,843,731	-				-1.3
3,843,740	+				-0.4
3,843,740	+				+0.5
3,843,760	+				+0.7
3,843,760	+				-0.8
3,843,806	+				-1.4
3,843,807	-				-0.9
3,843,807	-				-1.4
3,843,807	-				-2.7
3,843,846	-				-0.9
3,843,846	-				-2.1
3,843,876	-				-1.6
3,843,919	+				-0.3
3,843,920	-				-1.7
3,844,063	+				-1.5
3,844,064	-				-0.9
3,844,140	+				-3.5
3,844,140	+				+1.0
3,844,141	-				-2.1
3,844,141	-				-3.5
3,844,169	+				+0.0
3,844,170	-				+0.1
3,844,170	-				-0.7
3,844,170	-				-0.5
3,844,170	-				+1.9
3,844,249	+				-2.4
3,844,397	+		Psyr_3211	0.19	-3.4
3,844,397	+		Psyr_3211	0.19	+0.7
3,844,397	+		Psyr_3211	0.19	-0.0
3,844,397	+		Psyr_3211	0.19	-0.3
3,844,398	-		Psyr_3211	0.19	-1.6
3,844,398	-		Psyr_3211	0.19	-0.8
3,844,398	-		Psyr_3211	0.19	-2.7
3,844,479	+		Psyr_3211	0.26	+3.9
3,844,479	+		Psyr_3211	0.26	-0.9
3,844,479	+		Psyr_3211	0.26	-1.9
3,844,479	+		Psyr_3211	0.26	-2.1
3,844,479	+		Psyr_3211	0.26	-0.7
3,844,479	+		Psyr_3211	0.26	-2.2
3,844,479	+		Psyr_3211	0.26	-0.3
3,844,479	+		Psyr_3211	0.26	-3.0
3,844,479	+		Psyr_3211	0.26	-2.1
3,844,480	-		Psyr_3211	0.26	-0.4
3,844,480	-		Psyr_3211	0.26	-1.9
3,844,480	-		Psyr_3211	0.26	+0.7
3,844,480	-		Psyr_3211	0.26	-2.3
3,844,480	-		Psyr_3211	0.26	-0.3
3,844,799	-		Psyr_3211	0.50	-0.7
3,844,962	-		Psyr_3211	0.62	+0.1
3,845,037	+		Psyr_3211	0.68	-0.9
3,845,223	+		Psyr_3211	0.82	+1.3
3,845,224	-		Psyr_3211	0.82	-2.7
3,845,224	-		Psyr_3211	0.82	-0.9
3,845,478	-				-0.3
3,845,557	-		Psyr_3212	0.15	+0.5
3,845,557	-		Psyr_3212	0.15	-0.6
3,845,588	+		Psyr_3212	0.19	-1.3
3,845,588	+		Psyr_3212	0.19	-2.7
3,845,645	+		Psyr_3212	0.28	+0.3
3,845,727	+		Psyr_3212	0.40	-1.8
3,845,727	+		Psyr_3212	0.40	-1.0
3,845,793	+		Psyr_3212	0.50	-0.4
3,845,834	+		Psyr_3212	0.56	-3.3
3,845,834	+		Psyr_3212	0.56	+0.4
3,845,835	-		Psyr_3212	0.56	-2.7
3,845,863	+		Psyr_3212	0.61	-2.3
3,845,863	+		Psyr_3212	0.61	-0.9
3,845,863	+		Psyr_3212	0.61	+0.2
3,845,863	+		Psyr_3212	0.61	-1.8
3,845,863	+		Psyr_3212	0.61	-2.7
3,845,863	+		Psyr_3212	0.61	+0.0
3,845,863	+		Psyr_3212	0.61	-1.3
3,845,863	+		Psyr_3212	0.61	-3.1
3,845,863	+		Psyr_3212	0.61	-3.1
3,845,864	-		Psyr_3212	0.61	-0.0
3,845,864	-		Psyr_3212	0.61	-2.6
3,845,864	-		Psyr_3212	0.61	-0.4
3,845,864	-		Psyr_3212	0.61	+3.5
3,845,864	-		Psyr_3212	0.61	+0.7
3,845,864	-		Psyr_3212	0.61	-0.3
3,845,865	+		Psyr_3212	0.61	-1.9
3,845,994	-		Psyr_3212	0.80	-1.1
3,846,014	+		Psyr_3212	0.83	-4.1
3,846,054	-		Psyr_3212	0.89	-1.9
3,846,115	+				-3.2
3,846,220	+		Psyr_3213	0.30	-1.3
3,846,226	+		Psyr_3213	0.32	-3.3
3,846,226	+		Psyr_3213	0.32	-1.9
3,846,226	+		Psyr_3213	0.32	-3.4
3,846,226	+		Psyr_3213	0.32	-1.9
3,846,226	+		Psyr_3213	0.32	-2.6
3,846,233	+		Psyr_3213	0.35	+0.4
3,846,233	+		Psyr_3213	0.35	-2.9
3,846,318	+		Psyr_3213	0.62	-2.3
3,846,435	+				-3.5
3,846,457	-				-1.3