Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3183

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,809,932	+		Psyr_3181	0.44	-0.6
3,809,953	+		Psyr_3181	0.47	+0.7
3,809,953	+		Psyr_3181	0.47	+1.1
3,809,953	+		Psyr_3181	0.47	-1.3
3,809,953	+		Psyr_3181	0.47	-1.3
3,809,955	+		Psyr_3181	0.48	+0.5
3,809,955	+		Psyr_3181	0.48	+1.3
3,809,955	+		Psyr_3181	0.48	+0.4
3,810,124	+		Psyr_3181	0.72	-0.9
3,810,262	+				-1.6
3,810,262	+				-1.6
3,810,262	+				+0.4
3,810,262	+				-0.9
3,810,262	+				-1.7
3,810,262	+				-0.2
3,810,406	+				+0.6
3,810,406	+				+1.1
3,810,672	-				-1.3
3,811,403	-		Psyr_3183	0.28	-1.0
3,811,448	+		Psyr_3183	0.30	+0.5
3,811,449	-		Psyr_3183	0.30	+1.0
3,811,449	-		Psyr_3183	0.30	+1.3
3,811,450	+		Psyr_3183	0.30	-0.9
3,811,450	+		Psyr_3183	0.30	-0.3
3,811,450	+		Psyr_3183	0.30	+1.6
3,811,450	+		Psyr_3183	0.30	+1.5
3,811,451	-		Psyr_3183	0.30	+2.2
3,811,451	-		Psyr_3183	0.30	+1.0
3,811,451	-		Psyr_3183	0.30	+0.6
3,811,451	-		Psyr_3183	0.30	+2.3
3,811,451	-		Psyr_3183	0.30	+0.3
3,811,641	+		Psyr_3183	0.39	+0.5
3,811,641	+		Psyr_3183	0.39	+0.3
3,811,642	-		Psyr_3183	0.39	-0.1
3,811,715	+		Psyr_3183	0.42	+3.0
3,811,716	-		Psyr_3183	0.42	-0.9
3,811,716	-		Psyr_3183	0.42	-0.1
3,811,841	+		Psyr_3183	0.47	+0.3
3,811,841	+		Psyr_3183	0.47	+0.2
3,811,842	-		Psyr_3183	0.47	+0.7
3,811,842	-		Psyr_3183	0.47	-0.9
3,811,859	-		Psyr_3183	0.48	+2.5
3,811,903	+		Psyr_3183	0.50	-0.9
3,811,904	-		Psyr_3183	0.50	+0.1
3,812,285	-		Psyr_3183	0.67	+0.2
3,812,285	-		Psyr_3183	0.67	+0.1
3,812,507	-		Psyr_3183	0.77	+0.1
3,812,612	+		Psyr_3183	0.81	+0.5
3,812,626	+		Psyr_3183	0.82	+1.7
3,812,626	+		Psyr_3183	0.82	+1.0
3,812,626	+		Psyr_3183	0.82	-0.3
3,812,627	-		Psyr_3183	0.82	-0.5
3,812,627	-		Psyr_3183	0.82	-0.0
3,812,627	-		Psyr_3183	0.82	+1.7
3,812,627	-		Psyr_3183	0.82	-1.4
3,812,627	-		Psyr_3183	0.82	+1.0
3,812,935	-				-0.3
3,813,030	+				+0.1
3,813,035	+				+0.1
3,813,035	+				-1.5
3,813,035	+				+0.1
3,813,035	+				-2.4
3,813,035	+				+0.7
3,813,035	+				-1.7
3,813,035	+				-2.3
3,813,035	+				-1.6
3,813,035	+				+1.1
3,813,035	+				+0.1
3,813,036	-				+1.7
3,813,036	-				+0.4
3,813,036	-				+1.2
3,813,036	-				-1.0
3,813,036	-				+2.3
3,813,036	-				+0.4
3,813,036	-				-1.7
3,813,036	-				-2.3
3,813,036	-				-0.9
3,813,036	-				-0.6
3,813,259	-		Psyr_3184	0.53	+1.0
3,813,307	+		Psyr_3184	0.66	-0.3
3,813,307	+		Psyr_3184	0.66	-0.4
3,813,307	+		Psyr_3184	0.66	+1.1
3,813,307	+		Psyr_3184	0.66	+1.5
3,813,307	+		Psyr_3184	0.66	+0.3
3,813,308	-		Psyr_3184	0.67	+0.9
3,813,308	-		Psyr_3184	0.67	+1.5
3,813,467	-				-0.6
3,813,618	+				-0.3
3,813,618	+				+0.1
3,813,619	-				-1.6
3,813,960	+				-1.9
3,813,960	+				-1.9
3,813,960	+				-1.6
3,813,960	+				+0.1
3,813,960	+				-0.9
3,813,960	+				-0.6
3,813,960	+				-3.4
3,813,960	+				-1.9
3,813,960	+				-2.4
3,813,961	-				-2.7
3,813,961	-				-0.9
3,813,961	-				-2.7
3,813,961	-				-0.9
3,813,961	-				-1.0
3,813,961	-				+0.3
3,813,961	-				+1.0
3,814,024	+				-1.7
3,814,025	-				-0.8
3,814,025	-				-0.4