Experiment: KB with Novobiocin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3102 and Psyr_3103 are separated by 0 nucleotides Psyr_3103 and Psyr_3104 overlap by 1 nucleotides Psyr_3104 and Psyr_3105 overlap by 4 nucleotides
Psyr_3102: Psyr_3102 - transcriptional regulator, LysR family, at 3,719,982 to 3,720,911
_3102
Psyr_3103: Psyr_3103 - phosphate ABC transporter ATP-binding protein, PhoT family, at 3,720,912 to 3,721,691
_3103
Psyr_3104: Psyr_3104 - phosphate ABC transporter membrane protein 2, PhoT family, at 3,721,691 to 3,722,575
_3104
Psyr_3105: Psyr_3105 - phosphate ABC transporter membrane protein 1, PhoT family, at 3,722,572 to 3,723,567
_3105
Position (kb) 3721
3722
3723 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 3720.759 kb on + strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.760 kb on - strand, within Psyr_3102 at 3720.934 kb on + strand at 3720.934 kb on + strand at 3720.934 kb on + strand at 3720.935 kb on - strand at 3720.935 kb on - strand at 3720.935 kb on - strand at 3721.024 kb on + strand, within Psyr_3103 at 3721.024 kb on + strand, within Psyr_3103 at 3721.025 kb on - strand, within Psyr_3103 at 3721.090 kb on - strand, within Psyr_3103 at 3721.090 kb on - strand, within Psyr_3103 at 3721.363 kb on + strand, within Psyr_3103 at 3721.435 kb on + strand, within Psyr_3103 at 3721.498 kb on + strand, within Psyr_3103 at 3721.508 kb on - strand, within Psyr_3103 at 3721.508 kb on - strand, within Psyr_3103 at 3721.718 kb on + strand at 3721.745 kb on + strand at 3721.746 kb on - strand at 3721.941 kb on - strand, within Psyr_3104 at 3722.181 kb on + strand, within Psyr_3104 at 3722.181 kb on + strand, within Psyr_3104 at 3722.263 kb on - strand, within Psyr_3104 at 3722.504 kb on + strand at 3722.569 kb on + strand at 3722.576 kb on - strand at 3722.693 kb on + strand, within Psyr_3105 at 3722.693 kb on + strand, within Psyr_3105 at 3722.862 kb on - strand, within Psyr_3105 at 3722.913 kb on - strand, within Psyr_3105 at 3723.146 kb on + strand, within Psyr_3105 at 3723.146 kb on + strand, within Psyr_3105 at 3723.147 kb on - strand, within Psyr_3105 at 3723.147 kb on - strand, within Psyr_3105 at 3723.417 kb on + strand, within Psyr_3105 at 3723.417 kb on + strand, within Psyr_3105 at 3723.417 kb on + strand, within Psyr_3105 at 3723.417 kb on + strand, within Psyr_3105 at 3723.418 kb on - strand, within Psyr_3105 at 3723.418 kb on - strand, within Psyr_3105 at 3723.418 kb on - strand, within Psyr_3105 at 3723.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 250 ug/ml remove 3,720,759 + Psyr_3102 0.84 +2.3 3,720,760 - Psyr_3102 0.84 -0.9 3,720,760 - Psyr_3102 0.84 +0.9 3,720,760 - Psyr_3102 0.84 +0.4 3,720,760 - Psyr_3102 0.84 -0.7 3,720,760 - Psyr_3102 0.84 -1.8 3,720,934 + -0.6 3,720,934 + +0.8 3,720,934 + -0.4 3,720,935 - +0.6 3,720,935 - +0.8 3,720,935 - +0.9 3,721,024 + Psyr_3103 0.14 +1.4 3,721,024 + Psyr_3103 0.14 -0.3 3,721,025 - Psyr_3103 0.14 +0.0 3,721,090 - Psyr_3103 0.23 -1.2 3,721,090 - Psyr_3103 0.23 -1.0 3,721,363 + Psyr_3103 0.58 +0.4 3,721,435 + Psyr_3103 0.67 -0.2 3,721,498 + Psyr_3103 0.75 +2.3 3,721,508 - Psyr_3103 0.76 -2.2 3,721,508 - Psyr_3103 0.76 -0.8 3,721,718 + -0.1 3,721,745 + +1.4 3,721,746 - +1.1 3,721,941 - Psyr_3104 0.28 -1.6 3,722,181 + Psyr_3104 0.55 -0.9 3,722,181 + Psyr_3104 0.55 -0.2 3,722,263 - Psyr_3104 0.65 +0.8 3,722,504 + -1.0 3,722,569 + +1.4 3,722,576 - +1.2 3,722,693 + Psyr_3105 0.12 +0.6 3,722,693 + Psyr_3105 0.12 +1.3 3,722,862 - Psyr_3105 0.29 +0.1 3,722,913 - Psyr_3105 0.34 -2.8 3,723,146 + Psyr_3105 0.58 +1.6 3,723,146 + Psyr_3105 0.58 +0.3 3,723,147 - Psyr_3105 0.58 -0.3 3,723,147 - Psyr_3105 0.58 +1.8 3,723,417 + Psyr_3105 0.85 +3.0 3,723,417 + Psyr_3105 0.85 -1.8 3,723,417 + Psyr_3105 0.85 +2.0 3,723,417 + Psyr_3105 0.85 -2.3 3,723,418 - Psyr_3105 0.85 -2.6 3,723,418 - Psyr_3105 0.85 +0.7 3,723,418 - Psyr_3105 0.85 +0.7 3,723,548 + -0.3
Or see this region's nucleotide sequence