Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2860

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,430,378	+				-1.6
3,430,379	-				-2.6
3,430,388	+				+0.3
3,430,389	-				-1.2
3,430,389	-				+0.8
3,430,455	+				-3.7
3,430,456	-				-1.0
3,430,456	-				-2.3
3,430,513	+				-1.0
3,430,542	-				-0.7
3,430,542	-				-0.7
3,430,558	-				+0.1
3,430,669	-		Psyr_2859	0.27	-3.1
3,430,669	-		Psyr_2859	0.27	-2.1
3,430,783	+		Psyr_2859	0.44	-0.6
3,430,783	+		Psyr_2859	0.44	+1.0
3,430,784	-		Psyr_2859	0.45	-0.6
3,430,797	+		Psyr_2859	0.47	+0.3
3,430,881	-		Psyr_2859	0.60	+2.8
3,430,956	+		Psyr_2859	0.72	+0.0
3,431,027	-		Psyr_2859	0.83	-1.5
3,431,033	+		Psyr_2859	0.84	+1.3
3,431,037	+		Psyr_2859	0.84	-0.6
3,431,037	+		Psyr_2859	0.84	-1.5
3,431,037	+		Psyr_2859	0.84	+0.4
3,431,038	-		Psyr_2859	0.84	+1.3
3,431,038	-		Psyr_2859	0.84	+0.8
3,431,038	-		Psyr_2859	0.84	-0.7
3,431,038	-		Psyr_2859	0.84	-2.7
3,431,078	+				+0.4
3,431,079	-				-2.3
3,431,079	-				+1.3
3,431,079	-				+0.1
3,431,079	-				+0.0
3,431,079	-				-0.3
3,431,079	-				-1.1
3,431,079	-				-1.2
3,431,144	+				+0.6
3,431,145	-				-1.2
3,431,145	-				-0.5
3,431,145	-				-1.3
3,431,256	+				-0.2
3,431,256	+				-0.7
3,431,256	+				+0.4
3,431,256	+				-0.3
3,431,256	+				+1.0
3,431,256	+				-1.0
3,431,256	+				-1.5
3,431,256	+				+0.8
3,431,256	+				-1.9
3,431,256	+				-1.0
3,431,256	+				-0.8
3,431,256	+				+0.5
3,431,256	+				-0.6
3,431,256	+				-1.3
3,431,256	+				+1.0
3,431,256	+				-0.3
3,431,256	+				-0.5
3,431,257	-				-0.3
3,431,257	-				+1.0
3,431,257	-				-0.0
3,431,257	-				+0.5
3,431,257	-				-1.5
3,431,257	-				-0.0
3,431,257	-				-0.5
3,431,257	-				+1.5
3,431,257	-				-2.3
3,431,257	-				+0.8
3,431,257	-				-1.2
3,431,257	-				-0.4
3,431,287	-				+1.1
3,431,287	-				+1.0
3,431,316	+				-0.2
3,431,381	+		Psyr_2860	0.17	-1.3
3,431,430	+		Psyr_2860	0.30	-0.2
3,431,431	-		Psyr_2860	0.30	-0.6
3,431,591	+		Psyr_2860	0.72	-0.1
3,431,647	+		Psyr_2860	0.87	-0.2
3,431,668	+				-0.5
3,431,668	+				-0.1
3,431,668	+				+2.1
3,431,669	-				+2.4
3,431,669	-				+0.1
3,431,688	+				-0.7
3,431,689	-				-2.2
3,431,750	-				-2.3
3,431,750	-				+0.8
3,432,137	-				-2.4
3,432,147	+				+2.8
3,432,147	+				+1.3
3,432,148	-				+2.5
3,432,148	-				+0.8
3,432,148	-				-0.2
3,432,153	+				+0.2
3,432,153	+				+0.7
3,432,156	+				-0.7
3,432,236	-				-3.4
3,432,260	+				-1.2
3,432,260	+				+0.1
3,432,260	+				+2.8
3,432,261	-				+0.1
3,432,261	-				-1.7
3,432,295	-				+1.3
3,432,315	+				-0.2
3,432,316	-				-0.1
3,432,316	-				-0.7
3,432,411	+				-0.6
3,432,411	+				-0.7
3,432,411	+				-2.2
3,432,412	-				+1.6
3,432,412	-				-0.2
3,432,412	-				+0.8
3,432,412	-				-1.6
3,432,543	+		Psyr_2862	0.18	-0.7
3,432,560	-		Psyr_2862	0.20	+0.2
3,432,560	-		Psyr_2862	0.20	+0.2
3,432,560	-		Psyr_2862	0.20	-2.2
3,432,560	-		Psyr_2862	0.20	-0.0
3,432,683	+		Psyr_2862	0.35	+1.1