Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2843

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,414,458	+				-2.7
3,414,458	+				-0.7
3,414,458	+				+0.9
3,414,458	+				-2.6
3,414,458	+				+0.9
3,414,459	-				+0.9
3,414,459	-				-1.7
3,414,459	-				-0.1
3,414,459	-				-0.4
3,414,513	+				-1.5
3,414,517	+				+0.3
3,414,517	+				+1.3
3,414,598	+				+2.4
3,414,598	+				-1.6
3,414,598	+				-2.1
3,414,599	-				-1.1
3,414,599	-				+1.0
3,414,599	-				-1.6
3,414,691	+		Psyr_2842	0.14	-3.6
3,414,691	+		Psyr_2842	0.14	-0.1
3,414,692	-		Psyr_2842	0.14	-1.1
3,414,692	-		Psyr_2842	0.14	-0.6
3,414,692	-		Psyr_2842	0.14	+0.9
3,414,718	-		Psyr_2842	0.17	+0.2
3,414,718	-		Psyr_2842	0.17	-2.1
3,414,718	-		Psyr_2842	0.17	+1.3
3,414,749	+		Psyr_2842	0.21	-2.1
3,414,762	-		Psyr_2842	0.22	+1.5
3,414,763	+		Psyr_2842	0.22	-1.1
3,414,818	+		Psyr_2842	0.29	-3.1
3,414,822	-		Psyr_2842	0.29	+0.3
3,414,843	+		Psyr_2842	0.32	+0.9
3,414,844	-		Psyr_2842	0.32	-2.3
3,414,865	+		Psyr_2842	0.35	-2.5
3,414,866	-		Psyr_2842	0.35	+0.1
3,414,869	+		Psyr_2842	0.35	-1.9
3,414,870	-		Psyr_2842	0.35	-2.9
3,414,878	+		Psyr_2842	0.36	-3.1
3,414,878	+				-0.7
3,414,906	+		Psyr_2842	0.39	-1.5
3,414,907	-		Psyr_2842	0.40	-0.7
3,414,936	+		Psyr_2842	0.43	-2.1
3,414,947	+		Psyr_2842	0.44	-1.5
3,414,952	-		Psyr_2842	0.45	-0.4
3,414,994	+				-0.7
3,414,994	+		Psyr_2842	0.50	+2.9
3,414,995	-		Psyr_2842	0.50	+0.1
3,414,999	-		Psyr_2842	0.51	+0.9
3,415,002	+		Psyr_2842	0.51	-1.1
3,415,003	-		Psyr_2842	0.51	+0.8
3,415,020	+		Psyr_2842	0.53	-2.5
3,415,050	+		Psyr_2842	0.57	-0.7
3,415,050	+		Psyr_2842	0.57	-0.9
3,415,051	-		Psyr_2842	0.57	+0.3
3,415,051	-		Psyr_2842	0.57	-3.2
3,415,053	-		Psyr_2842	0.57	+0.1
3,415,055	+		Psyr_2842	0.57	-1.5
3,415,056	-		Psyr_2842	0.58	-1.9
3,415,069	+		Psyr_2842	0.59	+0.9
3,415,140	+		Psyr_2842	0.68	-1.5
3,415,140	+		Psyr_2842	0.68	+0.2
3,415,145	-		Psyr_2842	0.68	-0.9
3,415,274	+		Psyr_2842	0.84	-2.2
3,415,275	-		Psyr_2842	0.84	-0.0
3,415,363	-				-1.1
3,415,363	-				+0.2
3,415,363	-				+0.9
3,415,363	-				+1.2
3,415,441	+				-1.1
3,415,441	+				+2.1
3,415,441	+				+2.9
3,415,441	+				+2.1
3,415,441	+				-0.5
3,415,442	-				+0.7
3,415,442	-				-0.0
3,415,442	-				-1.7
3,415,442	-				-2.5
3,415,675	-		Psyr_2843	0.11	+0.9
3,415,675	-		Psyr_2843	0.11	+0.2
3,415,675	-		Psyr_2843	0.11	-0.8
3,415,675	-		Psyr_2843	0.11	+0.5
3,415,863	+		Psyr_2843	0.20	+0.4
3,415,863	+		Psyr_2843	0.20	+1.0
3,416,102	-		Psyr_2843	0.31	+0.3
3,416,254	-		Psyr_2843	0.38	-0.7
3,416,254	-		Psyr_2843	0.38	+1.5
3,416,580	-		Psyr_2843	0.53	+2.7
3,416,706	-		Psyr_2843	0.59	+0.0
3,416,861	-		Psyr_2843	0.67	+0.1
3,417,142	+		Psyr_2843	0.80	+0.2
3,417,143	-		Psyr_2843	0.80	-0.5
3,417,143	-		Psyr_2843	0.80	+1.2
3,417,167	-		Psyr_2843	0.81	+0.7
3,417,180	+		Psyr_2843	0.81	-1.7
3,417,180	+		Psyr_2843	0.81	+1.3
3,417,181	-		Psyr_2843	0.82	+1.2
3,417,181	-		Psyr_2843	0.82	-0.5
3,417,181	-		Psyr_2843	0.82	-0.7
3,417,245	+		Psyr_2843	0.85	-0.3
3,417,246	-		Psyr_2843	0.85	+0.7
3,417,246	-		Psyr_2843	0.85	+2.1
3,417,246	-		Psyr_2843	0.85	-0.2
3,417,246	-		Psyr_2843	0.85	-0.7
3,417,246	-		Psyr_2843	0.85	+1.2
3,417,249	-		Psyr_2843	0.85	+0.9
3,417,395	+				-1.1
3,417,395	+				+1.9
3,417,395	+				-2.1
3,417,395	+				+0.3
3,417,395	+				-1.3
3,417,422	+				-0.1
3,417,423	-				+0.9
3,417,423	-				+1.2
3,417,573	-				+0.2
3,417,583	-				-1.4
3,417,598	+				-1.5
3,417,598	+				-2.5
3,417,598	+				-1.7
3,417,599	-				+0.2
3,417,602	+				+0.9
3,417,603	-				+0.1
3,417,631	+				-1.1
3,417,632	-				+0.9
3,417,660	+				-2.1
3,417,660	+				-1.0
3,417,660	+				-1.5
3,417,667	+				-1.3
3,417,667	+				+0.9
3,417,667	+				-0.7
3,417,668	-				+0.1
3,417,674	+				-1.4
3,417,675	-				-1.9
3,417,740	+		Psyr_2844	0.22	-1.2
3,417,741	-		Psyr_2844	0.23	+1.4
3,417,750	+		Psyr_2844	0.24	-0.1
3,417,751	-		Psyr_2844	0.25	+0.0
3,417,801	+		Psyr_2844	0.35	-0.9
3,417,802	-		Psyr_2844	0.35	+0.9
3,417,803	+		Psyr_2844	0.35	-2.8
3,417,877	+		Psyr_2844	0.50	-2.8
3,417,891	-		Psyr_2844	0.53	+1.8
3,417,906	-		Psyr_2844	0.56	-0.4
3,418,018	-		Psyr_2844	0.79	-0.1
3,418,068	+		Psyr_2844	0.89	-2.6
3,418,107	+				+1.0
3,418,163	+				-1.5
3,418,163	+				+2.9
3,418,163	+				+1.0
3,418,163	+				-0.7
3,418,164	-				+0.1
3,418,164	-				-0.2
3,418,164	-				-1.9
3,418,164	-				-0.6
3,418,164	-				-0.7
3,418,164	-				+0.9
3,418,164	-				-0.5
3,418,164	-				-0.2
3,418,165	+				-1.9
3,418,165	+				+0.6
3,418,165	+				+1.6
3,418,165	+				+1.9
3,418,166	-				+0.0
3,418,166	-				-0.0
3,418,167	+				+0.1
3,418,167	+				-0.6
3,418,167	+				-0.1
3,418,167	+				-0.4
3,418,167	+				-0.5
3,418,168	-				+0.6
3,418,168	-				+2.9
3,418,168	-				+1.0
3,418,168	-				+1.3
3,418,168	-				+0.6
3,418,168	-				-0.1
3,418,168	-				+0.7
3,418,168	-				+1.1
3,418,172	-				+0.9
3,418,269	+				-1.0
3,418,270	-				+1.6
3,418,270	-				-1.5
3,418,309	+				-0.6
3,418,321	+				-0.4
3,418,322	-				+0.3
3,418,460	+				-1.1
3,418,461	-				-0.3
3,418,461	-				+1.9
3,418,509	-				+0.3
3,418,526	+				-0.6
3,418,527	-				+0.6
3,418,544	+				+1.8