Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2651

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,221,438	+				-0.8
3,221,438	+				+0.4
3,221,439	-				-0.6
3,221,439	-				-0.9
3,221,601	+				-1.5
3,221,601	+				+0.2
3,221,601	+				-1.6
3,221,601	+				-0.2
3,221,601	+				-0.5
3,221,601	+				-0.0
3,221,601	+				-1.6
3,221,602	-				-0.5
3,221,602	-				+0.3
3,221,602	-				-1.1
3,221,602	-				+1.2
3,221,659	+				-0.4
3,221,660	-				-1.1
3,221,702	+				-1.1
3,221,719	+				+1.2
3,221,719	+				-0.0
3,221,720	-				-1.8
3,221,766	+				+0.2
3,221,766	+				+0.7
3,221,766	+				+0.4
3,221,767	-				+0.7
3,221,767	-				-2.8
3,221,767	-				+0.7
3,221,770	+				+0.2
3,221,770	+				-0.2
3,221,770	+				-1.8
3,221,770	+				+1.2
3,221,770	+				-0.6
3,221,770	+				-0.8
3,221,771	-				-3.0
3,221,771	-				-1.4
3,221,771	-				+1.0
3,221,771	-				-2.4
3,221,885	+				-0.4
3,221,885	+				-0.4
3,221,885	+				-1.5
3,221,885	+				+1.6
3,221,885	+				-2.8
3,221,886	-				-0.6
3,221,910	+				+2.2
3,221,910	+				+1.2
3,221,910	+				-1.3
3,221,910	+				-1.1
3,221,910	+				-1.3
3,221,911	-				-0.8
3,221,928	+				-2.8
3,221,928	+				-1.8
3,222,007	-		Psyr_2650	0.13	-0.0
3,222,038	+		Psyr_2650	0.20	-2.2
3,222,038	+		Psyr_2650	0.20	-0.5
3,222,039	-		Psyr_2650	0.20	-1.4
3,222,039	-		Psyr_2650	0.20	-2.8
3,222,041	+		Psyr_2650	0.21	+1.2
3,222,042	-		Psyr_2650	0.21	+1.0
3,222,042	-		Psyr_2650	0.21	-1.6
3,222,042	-		Psyr_2650	0.21	+0.9
3,222,141	+		Psyr_2650	0.42	-0.9
3,222,141	+		Psyr_2650	0.42	+0.8
3,222,142	-		Psyr_2650	0.42	-0.8
3,222,261	+		Psyr_2650	0.68	+0.7
3,222,285	+		Psyr_2650	0.73	+1.5
3,222,285	+		Psyr_2650	0.73	+0.2
3,222,321	+		Psyr_2650	0.80	+1.3
3,222,322	-		Psyr_2650	0.81	-0.3
3,222,322	-		Psyr_2650	0.81	-1.5
3,222,328	-		Psyr_2650	0.82	+0.8
3,222,328	-		Psyr_2650	0.82	-0.0
3,222,387	+				-1.2
3,222,388	-				+0.5
3,222,401	+				+0.2
3,222,401	+				-0.1
3,222,402	-				-0.3
3,222,405	+				-0.2
3,222,405	+				-1.0
3,222,405	+				-2.1
3,222,502	+				-0.4
3,222,502	+				-2.1
3,222,517	-				-0.6
3,222,577	-		Psyr_2651	0.16	+0.2
3,222,577	-		Psyr_2651	0.16	+1.0
3,222,625	+		Psyr_2651	0.21	-0.8
3,222,625	+		Psyr_2651	0.21	+1.4
3,222,626	-		Psyr_2651	0.21	-0.6
3,222,626	-		Psyr_2651	0.21	-1.1
3,222,626	-		Psyr_2651	0.21	-2.0
3,222,688	+				+0.2
3,222,688	+		Psyr_2651	0.28	-1.4
3,222,688	+		Psyr_2651	0.28	+0.8
3,222,688	+		Psyr_2651	0.28	-0.3
3,222,688	+		Psyr_2651	0.28	-0.4
3,222,688	+		Psyr_2651	0.28	-0.8
3,222,688	+		Psyr_2651	0.28	-1.1
3,222,689	-		Psyr_2651	0.28	-1.2
3,222,689	-		Psyr_2651	0.28	+0.3
3,222,689	-		Psyr_2651	0.28	-1.6
3,222,689	-		Psyr_2651	0.28	+0.8
3,222,689	-		Psyr_2651	0.28	+4.7
3,222,689	-		Psyr_2651	0.28	-0.6
3,222,689	-		Psyr_2651	0.28	+1.2
3,222,689	-		Psyr_2651	0.28	-1.6
3,222,689	-		Psyr_2651	0.28	-0.7
3,222,718	-		Psyr_2651	0.31	-1.3
3,222,727	+		Psyr_2651	0.32	+0.5
3,222,728	-		Psyr_2651	0.32	+0.5
3,222,728	-		Psyr_2651	0.32	-2.9
3,223,134	+		Psyr_2651	0.74	-0.4
3,223,135	-		Psyr_2651	0.74	-1.8
3,223,135	-		Psyr_2651	0.74	-2.9
3,223,135	-		Psyr_2651	0.74	-0.9
3,223,165	-		Psyr_2651	0.77	-1.6
3,223,165	-		Psyr_2651	0.77	-0.9
3,223,165	-		Psyr_2651	0.77	-1.4
3,223,220	+		Psyr_2651	0.83	-0.7
3,223,220	+		Psyr_2651	0.83	+0.2
3,223,220	+		Psyr_2651	0.83	-1.1
3,223,221	-		Psyr_2651	0.83	-0.7
3,223,221	-		Psyr_2651	0.83	-3.0
3,223,221	-				+0.6
3,223,221	-		Psyr_2651	0.83	-2.0
3,223,221	-		Psyr_2651	0.83	-1.4
3,223,221	-		Psyr_2651	0.83	-1.6
3,223,221	-		Psyr_2651	0.83	-2.3
3,223,226	-		Psyr_2651	0.84	-3.1
3,223,392	+				+0.2
3,223,417	+				-1.4
3,223,417	+				-0.2
3,223,417	+				+1.6
3,223,417	+				-0.5
3,223,418	-				-2.3
3,223,418	-				-2.7
3,223,418	-				+0.8
3,223,418	-				-2.4
3,223,418	-				+0.2
3,223,418	-				-0.2
3,223,528	+		Psyr_2652	0.23	-1.6
3,223,529	-		Psyr_2652	0.24	-2.3
3,223,532	+		Psyr_2652	0.24	-2.7
3,223,532	+		Psyr_2652	0.24	+0.5
3,223,532	+		Psyr_2652	0.24	+1.0
3,223,532	+		Psyr_2652	0.24	+1.2
3,223,532	+		Psyr_2652	0.24	-2.0
3,223,533	-		Psyr_2652	0.24	-2.1
3,223,533	-		Psyr_2652	0.24	-2.7
3,223,533	-		Psyr_2652	0.24	+0.2
3,223,533	-		Psyr_2652	0.24	-1.8
3,223,533	-		Psyr_2652	0.24	-1.4
3,223,583	+		Psyr_2652	0.32	+0.8
3,223,584	-		Psyr_2652	0.32	-0.8
3,223,584	-		Psyr_2652	0.32	-0.0
3,223,584	-		Psyr_2652	0.32	-2.8
3,223,606	+		Psyr_2652	0.35	-0.4
3,223,606	+		Psyr_2652	0.35	+0.4
3,223,606	+		Psyr_2652	0.35	-0.0
3,223,607	-		Psyr_2652	0.35	-0.5
3,223,609	-		Psyr_2652	0.35	-2.1
3,223,658	-		Psyr_2652	0.43	-3.0
3,223,706	+		Psyr_2652	0.50	-1.4
3,223,706	+		Psyr_2652	0.50	-1.0
3,223,706	+		Psyr_2652	0.50	-0.1
3,223,706	+		Psyr_2652	0.50	+2.5
3,223,706	+		Psyr_2652	0.50	-1.2
3,223,707	-		Psyr_2652	0.50	-1.8
3,223,707	-		Psyr_2652	0.50	-1.1
3,223,707	-		Psyr_2652	0.50	+2.2
3,223,707	-		Psyr_2652	0.50	-1.1
3,223,707	-		Psyr_2652	0.50	+0.2
3,223,707	-		Psyr_2652	0.50	-1.3
3,223,780	+		Psyr_2652	0.61	-0.4
3,223,780	+		Psyr_2652	0.61	+0.5
3,223,781	-		Psyr_2652	0.61	+0.5
3,223,852	+		Psyr_2652	0.71	-0.0
3,223,904	+		Psyr_2652	0.79	-0.4
3,223,905	-		Psyr_2652	0.79	-0.6
3,223,905	-		Psyr_2652	0.79	+0.0
3,224,036	+				-0.1
3,224,037	-				-0.4
3,224,037	-				-1.4
3,224,051	+				+2.2
3,224,052	-				-0.5
3,224,052	-				+0.9
3,224,052	-				+0.8
3,224,052	-				-1.1
3,224,052	-				+0.7
3,224,052	-				+1.3
3,224,073	-				+1.2
3,224,115	+				+1.3
3,224,136	-				+0.9
3,224,136	-				-1.6
3,224,226	+				+0.4
3,224,227	-				-0.5
3,224,227	-				+0.0
3,224,296	-				+1.2