Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2625

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
3,183,904	+		Psyr_2623	0.72	-1.9
3,183,904	+		Psyr_2623	0.72	-0.8
3,183,904	+		Psyr_2623	0.72	+0.7
3,183,905	-		Psyr_2623	0.72	-2.4
3,183,906	+		Psyr_2623	0.72	-1.4
3,183,907	-		Psyr_2623	0.73	+1.2
3,183,949	+		Psyr_2623	0.76	-0.8
3,183,968	-		Psyr_2623	0.77	-1.9
3,184,298	+				+0.6
3,184,302	+				-1.1
3,184,303	-				+0.4
3,184,327	-				+0.2
3,184,327	-				+0.3
3,184,327	-				+1.4
3,184,327	-				+0.8
3,184,597	+		Psyr_2624	0.58	-0.1
3,184,799	+				-0.6
3,184,802	+				-0.7
3,184,803	-				+0.2
3,184,848	-				+0.0
3,184,938	+		Psyr_2625	0.17	-0.4
3,184,970	+		Psyr_2625	0.21	-2.0
3,184,970	+		Psyr_2625	0.21	+1.2
3,184,979	-		Psyr_2625	0.22	-0.6
3,185,007	+		Psyr_2625	0.26	-1.4
3,185,144	+		Psyr_2625	0.44	+0.5
3,185,144	+		Psyr_2625	0.44	-0.8
3,185,145	-		Psyr_2625	0.45	-0.3
3,185,145	-		Psyr_2625	0.45	+0.0
3,185,145	-		Psyr_2625	0.45	-0.8
3,185,148	+		Psyr_2625	0.45	-0.5
3,185,149	-		Psyr_2625	0.45	-1.0
3,185,179	+		Psyr_2625	0.49	-0.7
3,185,222	+		Psyr_2625	0.55	-1.9
3,185,222	+		Psyr_2625	0.55	-0.3
3,185,223	-		Psyr_2625	0.55	-1.6
3,185,243	+		Psyr_2625	0.58	-1.2
3,185,243	+		Psyr_2625	0.58	-0.8
3,185,243	+		Psyr_2625	0.58	-3.4
3,185,244	-		Psyr_2625	0.58	+0.4
3,185,246	+		Psyr_2625	0.58	+0.2
3,185,246	+		Psyr_2625	0.58	-0.3
3,185,249	+		Psyr_2625	0.59	-2.1
3,185,249	+		Psyr_2625	0.59	-0.8
3,185,249	+		Psyr_2625	0.59	-1.2
3,185,249	+		Psyr_2625	0.59	-2.2
3,185,249	+		Psyr_2625	0.59	+0.4
3,185,250	-		Psyr_2625	0.59	+2.0
3,185,250	-		Psyr_2625	0.59	-0.8
3,185,343	+		Psyr_2625	0.71	-0.5
3,185,347	+		Psyr_2625	0.72	-1.1
3,185,542	+				-1.1
3,185,543	-				+0.8
3,185,543	-				+0.1
3,185,543	-				+1.2
3,185,543	-				+1.0
3,185,543	-				-1.4
3,185,543	-				-1.8
3,185,587	+				-0.7
3,185,601	-				-1.8
3,185,628	+				+0.5
3,185,629	-				-1.4
3,185,781	+		Psyr_2626	0.13	+0.4
3,185,797	+		Psyr_2626	0.14	+0.3
3,185,849	+		Psyr_2626	0.17	-0.0
3,185,899	+		Psyr_2626	0.20	+0.0
3,185,923	+		Psyr_2626	0.22	-2.1
3,185,923	+		Psyr_2626	0.22	-0.6
3,185,923	+		Psyr_2626	0.22	-0.4
3,185,923	+		Psyr_2626	0.22	-1.4
3,185,924	-		Psyr_2626	0.22	-1.8
3,186,268	+		Psyr_2626	0.44	-0.0
3,186,268	+		Psyr_2626	0.44	+1.2
3,186,269	-		Psyr_2626	0.44	-1.0
3,186,272	-		Psyr_2626	0.44	-0.2
3,186,272	-		Psyr_2626	0.44	+0.9
3,186,272	-		Psyr_2626	0.44	+0.5
3,186,272	-		Psyr_2626	0.44	-1.2