Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2527

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
2,937,307	+		Psyr_2526	0.45	+0.8
2,937,308	-		Psyr_2526	0.45	-0.1
2,937,373	+		Psyr_2526	0.49	+0.4
2,937,374	-		Psyr_2526	0.49	-0.0
2,937,626	+		Psyr_2526	0.65	-1.7
2,937,626	+		Psyr_2526	0.65	+0.9
2,937,736	+		Psyr_2526	0.72	-0.1
2,937,736	+		Psyr_2526	0.72	+1.0
2,937,736	+		Psyr_2526	0.72	-0.5
2,937,737	-		Psyr_2526	0.72	+4.0
2,937,917	-		Psyr_2526	0.83	-1.5
2,937,931	+		Psyr_2526	0.84	-1.0
2,937,932	-		Psyr_2526	0.84	+1.0
2,937,937	+		Psyr_2526	0.84	-0.0
2,937,937	+		Psyr_2526	0.84	-0.1
2,937,938	-		Psyr_2526	0.84	-0.7
2,938,003	+		Psyr_2526	0.89	+0.3
2,938,039	+				-0.5
2,938,039	+				-2.5
2,938,040	-				-0.2
2,938,040	-				-0.8
2,938,070	+				+1.7
2,938,152	+				-0.2
2,938,152	+				-0.8
2,938,152	+				-0.2
2,938,221	+				+1.3
2,938,221	+				-0.8
2,938,221	+				-0.1
2,938,266	-				+0.5
2,938,286	+				-1.4
2,938,286	+				+0.4
2,938,286	+				-1.6
2,938,286	+				-0.4
2,938,286	+				+0.7
2,938,491	+		Psyr_2527	0.19	-1.4
2,938,588	-		Psyr_2527	0.27	+0.2
2,938,636	-		Psyr_2527	0.31	+0.1
2,938,677	+		Psyr_2527	0.35	-0.4
2,938,678	-		Psyr_2527	0.35	-1.0
2,938,678	-		Psyr_2527	0.35	+1.2
2,938,681	-		Psyr_2527	0.35	-0.2
2,938,681	-		Psyr_2527	0.35	-0.9
2,938,707	+		Psyr_2527	0.37	+0.1
2,939,285	+		Psyr_2527	0.88	-1.1
2,939,285	+		Psyr_2527	0.88	-0.8
2,939,285	+		Psyr_2527	0.88	-0.6
2,939,286	-		Psyr_2527	0.88	-2.2
2,939,286	-		Psyr_2527	0.88	-1.4
2,939,286	-		Psyr_2527	0.88	-2.8
2,939,428	+				+1.2
2,939,428	+				-1.6
2,939,428	+				+0.2
2,939,429	-				+0.1
2,939,429	-				+1.2
2,939,429	-				+0.8
2,939,595	-		Psyr_2528	0.19	+0.5
2,939,595	-		Psyr_2528	0.19	+0.5
2,939,595	-		Psyr_2528	0.19	+0.2
2,939,595	-		Psyr_2528	0.19	+0.2
2,939,595	-		Psyr_2528	0.19	-1.8
2,939,987	+		Psyr_2528	0.62	-1.2
2,939,987	+		Psyr_2528	0.62	+0.1
2,939,989	+		Psyr_2528	0.63	+0.6
2,939,990	-		Psyr_2528	0.63	+0.5
2,939,990	-		Psyr_2528	0.63	+1.2
2,940,209	+		Psyr_2528	0.87	-1.2
2,940,210	-		Psyr_2528	0.87	+2.5