Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2451

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
2,838,355	+		Psyr_2450	0.65	+0.7
2,838,356	-		Psyr_2450	0.65	-1.5
2,838,356	-		Psyr_2450	0.65	-1.0
2,838,356	-		Psyr_2450	0.65	+0.5
2,838,393	+		Psyr_2450	0.66	+0.2
2,838,668	+		Psyr_2450	0.80	-0.2
2,838,876	+				+2.1
2,838,876	+				+0.5
2,838,876	+				+1.1
2,838,876	+				-0.5
2,838,876	+				-2.8
2,838,877	-				+1.5
2,839,069	-				-1.5
2,839,114	+				-0.3
2,839,114	+				+0.3
2,839,115	-				+1.4
2,839,115	-				-0.9
2,839,115	-				+0.4
2,839,115	-				+0.9
2,839,115	-				-0.3
2,839,193	-				-0.1
2,839,255	-		Psyr_2451	0.12	+0.3
2,839,306	+		Psyr_2451	0.16	+0.5
2,839,306	+		Psyr_2451	0.16	-1.7
2,839,306	+		Psyr_2451	0.16	-1.5
2,839,306	+		Psyr_2451	0.16	-0.1
2,839,307	-		Psyr_2451	0.16	-3.4
2,839,311	-		Psyr_2451	0.16	-0.8
2,839,311	-		Psyr_2451	0.16	-0.2
2,839,311	-		Psyr_2451	0.16	+0.1
2,839,311	-		Psyr_2451	0.16	+0.4
2,839,394	-		Psyr_2451	0.22	-0.5
2,839,394	-		Psyr_2451	0.22	-2.8
2,839,454	-		Psyr_2451	0.26	+2.6
2,839,497	-		Psyr_2451	0.29	-1.1
2,839,654	-		Psyr_2451	0.39	+0.4
2,839,828	+		Psyr_2451	0.51	+0.4
2,839,930	+		Psyr_2451	0.58	+3.1
2,839,931	-		Psyr_2451	0.58	+0.6
2,839,966	+		Psyr_2451	0.60	-0.3
2,839,966	+		Psyr_2451	0.60	-1.2
2,839,966	+		Psyr_2451	0.60	+0.4
2,839,967	-		Psyr_2451	0.60	-0.7
2,839,970	+		Psyr_2451	0.61	+0.1
2,839,970	+		Psyr_2451	0.61	-0.1
2,839,970	+		Psyr_2451	0.61	-0.7
2,839,971	-		Psyr_2451	0.61	-1.6
2,839,994	+		Psyr_2451	0.62	-2.6
2,840,086	+		Psyr_2451	0.68	+3.4
2,840,117	-		Psyr_2451	0.70	+2.1
2,840,245	+		Psyr_2451	0.79	-1.5
2,840,245	+		Psyr_2451	0.79	-1.0
2,840,245	+		Psyr_2451	0.79	-2.5
2,840,245	+		Psyr_2451	0.79	-0.7
2,840,246	-		Psyr_2451	0.79	+2.1
2,840,306	+		Psyr_2451	0.83	-0.1
2,840,307	-		Psyr_2451	0.83	-1.3
2,840,307	-		Psyr_2451	0.83	-1.7
2,840,312	+		Psyr_2451	0.84	-0.6
2,840,312	+		Psyr_2451	0.84	-0.5
2,840,312	+		Psyr_2451	0.84	+0.3
2,840,312	+		Psyr_2451	0.84	+0.1
2,840,313	-		Psyr_2451	0.84	+0.3
2,840,313	-		Psyr_2451	0.84	-1.7
2,840,313	-		Psyr_2451	0.84	+0.3
2,840,386	+		Psyr_2451	0.89	-0.5
2,840,386	+		Psyr_2451	0.89	+0.1
2,840,386	+		Psyr_2451	0.89	-0.5
2,840,386	+		Psyr_2451	0.89	+0.3
2,840,386	+		Psyr_2451	0.89	-1.7
2,840,387	-		Psyr_2451	0.89	-1.2
2,840,387	-		Psyr_2451	0.89	-0.1
2,840,387	-		Psyr_2451	0.89	-0.4
2,840,387	-		Psyr_2451	0.89	-0.7
2,840,395	-		Psyr_2451	0.89	-0.2
2,840,549	+				-0.0
2,840,549	+				+0.5
2,840,550	-				-2.5
2,840,558	-				-3.0
2,840,558	-				-3.1
2,840,592	-				-1.7
2,840,657	+				+1.4
2,840,658	-				+0.4
2,840,658	-				+0.1
2,840,659	+				-0.3
2,840,660	-				+2.0
2,840,731	+				-0.9
2,840,733	+				+0.5
2,840,733	+				+2.1
2,840,733	+				-0.8
2,840,734	-				+0.6
2,840,734	-				-1.5
2,840,734	-				-0.9
2,840,734	-				+0.4
2,840,827	+				+0.2
2,840,827	+				-0.6
2,840,828	-				-0.6
2,840,905	+		Psyr_2452	0.16	-0.3
2,841,292	-		Psyr_2452	0.64	-1.1
2,841,453	+		Psyr_2452	0.83	+3.1
2,841,453	+		Psyr_2452	0.83	+0.6
2,841,453	+		Psyr_2452	0.83	-1.2
2,841,453	+		Psyr_2452	0.83	+0.2
2,841,453	+		Psyr_2452	0.83	-0.5
2,841,453	+		Psyr_2452	0.83	+0.4
2,841,453	+		Psyr_2452	0.83	-0.4
2,841,453	+		Psyr_2452	0.83	+0.5
2,841,453	+		Psyr_2452	0.83	-2.9
2,841,454	-		Psyr_2452	0.84	+1.0
2,841,454	-		Psyr_2452	0.84	-0.3
2,841,454	-		Psyr_2452	0.84	+0.7
2,841,454	-		Psyr_2452	0.84	+0.1
2,841,454	-		Psyr_2452	0.84	-3.0
2,841,454	-		Psyr_2452	0.84	+0.9
2,841,454	-		Psyr_2452	0.84	-1.9
2,841,454	-		Psyr_2452	0.84	-0.8
2,841,454	-		Psyr_2452	0.84	-0.6