Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2113

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
2,468,452	+		Psyr_2111	0.88	+0.3
2,468,574	-				-1.7
2,468,634	+				-0.6
2,468,643	-				-1.2
2,468,694	+				-0.4
2,468,705	+				-1.7
2,468,720	+				+0.6
2,468,724	+				+1.6
2,468,724	+				-0.7
2,468,724	+				-0.5
2,468,724	+				-0.1
2,468,724	+				-0.7
2,468,724	+				-1.1
2,468,724	+				+1.3
2,468,724	+				+0.4
2,468,724	+				-0.1
2,468,724	+				+0.2
2,468,724	+				+0.5
2,468,724	+				-0.2
2,468,724	+				-0.1
2,468,725	-				+0.6
2,468,725	-				-1.5
2,468,725	-				+0.9
2,468,725	-				-0.2
2,468,725	-				-1.5
2,468,725	-				-1.1
2,468,725	-				-0.1
2,468,725	-				+0.6
2,468,725	-				-4.0
2,468,725	-				-1.4
2,468,725	-				-0.2
2,468,725	-				+0.1
2,468,726	+				+0.4
2,468,726	+				+0.4
2,468,726	+				-0.8
2,468,727	-				-2.7
2,468,729	+				+0.5
2,468,778	+				+0.7
2,468,790	+				-0.6
2,468,791	-				+0.9
2,468,840	+				-0.6
2,468,949	+				+1.3
2,468,949	+				-0.8
2,468,949	+				-0.6
2,468,950	-				+0.9
2,468,950	-				-1.2
2,469,136	+		Psyr_2112	0.49	-0.7
2,469,137	-		Psyr_2112	0.49	-0.6
2,469,137	-		Psyr_2112	0.49	-3.4
2,469,316	-				+1.7
2,469,479	+				-1.1
2,469,479	+				+1.4
2,469,479	+				-1.0
2,469,480	-				-0.1
2,469,480	-				-0.2
2,469,480	-				-1.1
2,469,480	-				-0.1
2,469,637	+				-0.7
2,469,640	+				+0.5
2,469,641	-				-0.2
2,470,456	+		Psyr_2113	0.29	+0.9
2,470,516	+		Psyr_2113	0.31	-0.2
2,470,516	+		Psyr_2113	0.31	+0.9
2,470,516	+		Psyr_2113	0.31	+0.3
2,470,517	-		Psyr_2113	0.31	+0.9
2,470,517	-		Psyr_2113	0.31	-0.1
2,470,517	-		Psyr_2113	0.31	-0.7
2,470,517	-		Psyr_2113	0.31	-1.4
2,470,517	-		Psyr_2113	0.31	+1.3
2,470,546	+		Psyr_2113	0.32	-0.4
2,470,872	+		Psyr_2113	0.41	+2.0
2,470,872	+		Psyr_2113	0.41	+1.1
2,470,872	+		Psyr_2113	0.41	+0.5
2,470,873	-		Psyr_2113	0.41	+0.3
2,470,873	-		Psyr_2113	0.41	+0.3
2,470,978	+		Psyr_2113	0.44	+0.2
2,470,978	+		Psyr_2113	0.44	+0.2
2,470,978	+		Psyr_2113	0.44	+2.0
2,470,978	+		Psyr_2113	0.44	+0.7
2,470,979	-		Psyr_2113	0.44	-2.7
2,471,018	+		Psyr_2113	0.45	+0.2
2,471,018	+		Psyr_2113	0.45	-0.3
2,471,073	+		Psyr_2113	0.46	-0.5
2,471,096	+		Psyr_2113	0.47	-0.5
2,471,198	+		Psyr_2113	0.50	+0.5
2,471,198	+		Psyr_2113	0.50	+0.2
2,471,198	+		Psyr_2113	0.50	-1.5
2,471,199	-		Psyr_2113	0.50	+0.6
2,471,199	-		Psyr_2113	0.50	+0.5
2,471,199	-		Psyr_2113	0.50	+1.1
2,471,199	-		Psyr_2113	0.50	-0.8
2,471,199	-		Psyr_2113	0.50	+0.7
2,471,199	-		Psyr_2113	0.50	+0.6
2,471,223	+		Psyr_2113	0.50	+1.2
2,471,224	-		Psyr_2113	0.50	-0.5
2,471,243	+		Psyr_2113	0.51	-0.7
2,471,243	+		Psyr_2113	0.51	-2.3
2,471,244	-		Psyr_2113	0.51	+0.7
2,471,244	-		Psyr_2113	0.51	-0.3
2,471,244	-		Psyr_2113	0.51	-0.9
2,471,329	+		Psyr_2113	0.53	-2.2
2,471,330	-		Psyr_2113	0.53	+0.8
2,471,402	+		Psyr_2113	0.55	-0.2
2,471,402	+		Psyr_2113	0.55	-0.1
2,471,403	-		Psyr_2113	0.55	+0.9
2,471,417	+		Psyr_2113	0.56	-3.2
2,471,417	+		Psyr_2113	0.56	+0.2
2,471,417	+		Psyr_2113	0.56	+0.8
2,471,418	-		Psyr_2113	0.56	-1.7
2,471,447	+		Psyr_2113	0.57	-0.6
2,471,448	-		Psyr_2113	0.57	+1.1
2,471,448	-		Psyr_2113	0.57	-0.1
2,471,448	-		Psyr_2113	0.57	+0.0
2,471,631	-		Psyr_2113	0.62	-0.0
2,471,735	+		Psyr_2113	0.64	-0.2
2,471,810	+		Psyr_2113	0.67	-0.0
2,471,811	-		Psyr_2113	0.67	+0.5
2,471,811	-		Psyr_2113	0.67	-0.1
2,471,811	-		Psyr_2113	0.67	+0.6
2,471,864	+		Psyr_2113	0.68	+0.6
2,471,864	+		Psyr_2113	0.68	+4.1
2,471,865	-		Psyr_2113	0.68	+0.6
2,471,865	-		Psyr_2113	0.68	-0.7
2,472,013	+		Psyr_2113	0.72	-2.7
2,472,013	+		Psyr_2113	0.72	-0.2
2,472,014	-		Psyr_2113	0.72	+1.5
2,472,083	+		Psyr_2113	0.74	+0.7
2,472,083	+		Psyr_2113	0.74	-0.1
2,472,084	-		Psyr_2113	0.74	-0.9
2,472,084	-		Psyr_2113	0.74	-0.9
2,472,084	-		Psyr_2113	0.74	-1.9
2,472,112	-		Psyr_2113	0.75	+0.3
2,472,112	-		Psyr_2113	0.75	-0.2
2,472,365	+		Psyr_2113	0.82	+1.5
2,472,365	+		Psyr_2113	0.82	-0.7
2,472,365	+		Psyr_2113	0.82	-0.9
2,472,365	+		Psyr_2113	0.82	+3.1
2,472,365	+		Psyr_2113	0.82	+0.8
2,472,365	+		Psyr_2113	0.82	-1.7
2,472,365	+		Psyr_2113	0.82	+0.1
2,472,365	+		Psyr_2113	0.82	+1.7
2,472,365	+		Psyr_2113	0.82	-0.2
2,472,365	+		Psyr_2113	0.82	-0.8
2,472,366	-		Psyr_2113	0.82	+0.4
2,472,366	-		Psyr_2113	0.82	-1.0
2,472,366	-		Psyr_2113	0.82	+0.2
2,472,366	-		Psyr_2113	0.82	-1.0
2,472,366	-		Psyr_2113	0.82	-0.3
2,472,446	+		Psyr_2113	0.84	-0.1
2,472,446	+		Psyr_2113	0.84	+0.1
2,472,446	+		Psyr_2113	0.84	-0.0
2,472,446	+		Psyr_2113	0.84	+0.1
2,472,446	+		Psyr_2113	0.84	-0.5
2,472,500	+		Psyr_2113	0.86	+0.4
2,472,506	+		Psyr_2113	0.86	+0.3
2,472,506	+		Psyr_2113	0.86	+0.6
2,472,780	-				-2.9
2,472,877	-				-2.2
2,472,929	+				+0.4
2,472,929	+				-1.4
2,472,930	-				-0.2
2,472,970	+				-2.6
2,472,970	+				-4.0
2,472,970	+				-0.2
2,472,971	-				-2.6
2,472,971	-				+0.7
2,472,995	-				+0.9
2,472,997	+				-2.4
2,472,998	-				+1.1
2,472,998	-				-0.0
2,473,115	+		Psyr_2114	0.13	-0.1
2,473,115	+		Psyr_2114	0.13	+0.3
2,473,153	-		Psyr_2114	0.19	-1.9
2,473,182	+		Psyr_2114	0.24	-0.7
2,473,183	-		Psyr_2114	0.24	-0.1
2,473,192	-		Psyr_2114	0.26	+1.5
2,473,294	+		Psyr_2114	0.41	-2.1
2,473,305	+		Psyr_2114	0.43	-0.7
2,473,448	+		Psyr_2114	0.66	-2.4
2,473,448	+		Psyr_2114	0.66	+0.1
2,473,448	+		Psyr_2114	0.66	-3.3
2,473,449	-		Psyr_2114	0.66	-2.2
2,473,695	+				-0.1
2,473,743	+				+0.9
2,473,743	+				-0.1
2,473,743	+				+1.4
2,473,743	+				+0.4
2,473,745	+				-1.1
2,473,797	+				+0.9
2,473,804	+				+0.2
2,473,804	+				+0.7
2,473,961	+				+0.7
2,473,961	+				+0.3
2,473,961	+				+0.4
2,473,961	+				-0.1
2,473,962	-				-2.7
2,473,962	-				-3.0