Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2029

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
2,352,394	+				+1.2
2,352,394	+				-0.8
2,352,395	-				+0.4
2,352,507	+		Psyr_2028	0.10	-0.5
2,352,507	+		Psyr_2028	0.10	-0.4
2,352,508	-		Psyr_2028	0.10	-0.4
2,352,508	-		Psyr_2028	0.10	+0.9
2,352,508	-		Psyr_2028	0.10	-2.6
2,352,684	-		Psyr_2028	0.32	-0.3
2,352,690	+		Psyr_2028	0.32	-0.3
2,352,690	+		Psyr_2028	0.32	-2.4
2,352,691	-		Psyr_2028	0.32	+0.4
2,352,691	-		Psyr_2028	0.32	-0.2
2,352,691	-		Psyr_2028	0.32	-0.7
2,352,839	+		Psyr_2028	0.50	-0.6
2,352,840	-		Psyr_2028	0.50	-1.0
2,352,914	+		Psyr_2028	0.59	-1.7
2,352,914	+		Psyr_2028	0.59	-0.9
2,352,915	-		Psyr_2028	0.59	-2.6
2,352,944	+		Psyr_2028	0.63	-0.7
2,352,945	-		Psyr_2028	0.63	+0.2
2,353,084	+		Psyr_2028	0.80	+0.0
2,353,250	+				-0.2
2,353,284	+				+0.1
2,353,285	-				-0.7
2,353,835	+		Psyr_2029	0.49	+0.9
2,353,836	-		Psyr_2029	0.49	+0.2
2,353,907	+		Psyr_2029	0.56	+2.2
2,353,907	+		Psyr_2029	0.56	+0.8
2,353,908	-		Psyr_2029	0.56	+0.9
2,353,945	-		Psyr_2029	0.60	+1.3
2,354,198	+		Psyr_2029	0.84	+1.2
2,354,198	+		Psyr_2029	0.84	-0.2
2,354,199	-		Psyr_2029	0.84	-2.9
2,354,199	-		Psyr_2029	0.84	+1.1
2,354,199	-		Psyr_2029	0.84	-1.1
2,354,223	+		Psyr_2029	0.86	+0.3
2,354,319	-				-1.1
2,354,467	-				+1.0
2,354,467	-				-1.1
2,354,587	+		Psyr_2030	0.23	-0.3
2,354,615	-		Psyr_2030	0.27	+0.0
2,354,615	-		Psyr_2030	0.27	-1.2
2,354,672	-		Psyr_2030	0.34	-2.4
2,355,135	+				+1.1
2,355,136	-				+1.7
2,355,155	+				-1.0
2,355,253	+				+0.7
2,355,253	+				-0.4
2,355,254	-				-0.2
2,355,254	-				-0.2
2,355,254	-				-1.1
2,355,254	-				+0.8
2,355,254	-				+2.5
2,355,262	+				-1.9
2,355,262	+				+1.6
2,355,262	+				-1.9
2,355,262	+				+1.2
2,355,263	-				+0.7
2,355,263	-				-0.0
2,355,281	+				+1.7
2,355,281	+				+0.7
2,355,281	+				-0.9
2,355,281	+				-0.1
2,355,281	+				+1.9
2,355,282	-				+0.9
2,355,282	-				-0.1
2,355,282	-				-0.4
2,355,282	-				+0.1
2,355,282	-				+0.5