Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1897

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
2,169,648	+		Psyr_1896	0.77	+0.6
2,169,648	+		Psyr_1896	0.77	-0.7
2,169,648	+		Psyr_1896	0.77	+1.5
2,169,648	+		Psyr_1896	0.77	+1.6
2,169,648	+		Psyr_1896	0.77	+1.8
2,169,648	+		Psyr_1896	0.77	-0.6
2,169,648	+		Psyr_1896	0.77	+0.7
2,169,649	-		Psyr_1896	0.77	-1.7
2,169,649	-		Psyr_1896	0.77	-1.8
2,169,649	-		Psyr_1896	0.77	+1.0
2,169,649	-		Psyr_1896	0.77	-0.3
2,169,649	-		Psyr_1896	0.77	+0.7
2,169,649	-		Psyr_1896	0.77	+1.7
2,169,649	-		Psyr_1896	0.77	+0.5
2,169,649	-		Psyr_1896	0.77	-1.3
2,169,649	-		Psyr_1896	0.77	+2.5
2,169,651	+		Psyr_1896	0.78	-1.4
2,169,652	-		Psyr_1896	0.78	+1.1
2,169,652	-		Psyr_1896	0.78	+0.6
2,169,674	-		Psyr_1896	0.78	+1.7
2,169,674	-		Psyr_1896	0.78	+2.1
2,169,957	+		Psyr_1896	0.86	+0.4
2,169,957	+		Psyr_1896	0.86	-0.3
2,170,237	+				+0.7
2,170,237	+				-0.2
2,170,237	+				+0.2
2,170,237	+				-1.8
2,170,237	+				+0.9
2,170,238	-				+0.4
2,170,238	-				-0.3
2,170,505	+				-3.1
2,170,506	-				-2.0
2,170,508	+				+0.8
2,170,515	+				-0.6
2,170,516	-				+1.1
2,170,536	+				-1.3
2,170,536	+				+1.5
2,170,536	+				-2.1
2,170,537	-				+0.0
2,170,537	-				-1.0
2,170,537	-				+0.0
2,170,549	+				+0.8
2,170,589	+				-2.3
2,170,589	+				-0.0
2,170,589	+				+1.7
2,170,594	+				-2.3
2,170,594	+				-1.3
2,170,614	+				-2.0
2,170,614	+				+2.3
2,170,731	-				+0.7
2,170,731	-				-1.8
2,170,749	+				-0.3
2,170,750	-				+0.9
2,170,750	-				-0.3
2,170,844	-				-0.8
2,171,214	-		Psyr_1897	0.41	-1.4
2,171,274	+				-0.3
2,171,832	+		Psyr_1897	0.83	+1.0
2,171,986	-				+0.7
2,171,986	-				+0.5
2,171,986	-				+0.4
2,172,219	+				-4.0
2,172,333	-				-0.0
2,172,363	-		Psyr_1898	0.11	+0.5
2,172,363	-		Psyr_1898	0.11	-0.1
2,172,426	-		Psyr_1898	0.16	+1.5
2,172,545	-		Psyr_1898	0.25	-0.8
2,172,726	+		Psyr_1898	0.40	+0.2
2,172,726	+		Psyr_1898	0.40	+0.9
2,172,726	+		Psyr_1898	0.40	-1.0
2,172,726	+		Psyr_1898	0.40	+0.0
2,172,726	+		Psyr_1898	0.40	-0.4
2,172,726	+		Psyr_1898	0.40	+1.2
2,172,726	+		Psyr_1898	0.40	-0.5
2,172,726	+		Psyr_1898	0.40	-0.7
2,172,727	-		Psyr_1898	0.40	-0.1
2,172,727	-		Psyr_1898	0.40	+1.6
2,172,727	-		Psyr_1898	0.40	-0.1
2,172,727	-		Psyr_1898	0.40	+0.6
2,172,727	-		Psyr_1898	0.40	+0.3
2,172,727	-		Psyr_1898	0.40	+1.1
2,172,727	-		Psyr_1898	0.40	-0.8
2,172,807	+		Psyr_1898	0.46	+1.0
2,172,808	-		Psyr_1898	0.46	+1.2
2,172,808	-		Psyr_1898	0.46	+0.0
2,172,808	-		Psyr_1898	0.46	-0.1
2,172,808	-		Psyr_1898	0.46	-1.7
2,172,808	-		Psyr_1898	0.46	-0.3
2,172,815	-		Psyr_1898	0.47	+2.5
2,172,859	+		Psyr_1898	0.50	-3.0
2,172,860	-		Psyr_1898	0.50	-0.3
2,172,860	-		Psyr_1898	0.50	-0.3
2,172,917	+		Psyr_1898	0.55	+0.9
2,172,917	+		Psyr_1898	0.55	+2.5
2,172,918	-		Psyr_1898	0.55	-0.4
2,172,941	+		Psyr_1898	0.57	-1.1
2,172,941	+		Psyr_1898	0.57	-1.3
2,172,941	+		Psyr_1898	0.57	-1.0
2,172,941	+		Psyr_1898	0.57	-1.0
2,172,941	+		Psyr_1898	0.57	-0.6
2,172,941	+		Psyr_1898	0.57	-3.1
2,172,941	+		Psyr_1898	0.57	-1.4
2,172,941	+		Psyr_1898	0.57	+0.7
2,172,941	+		Psyr_1898	0.57	+0.5
2,172,941	+		Psyr_1898	0.57	+0.2
2,172,941	+		Psyr_1898	0.57	+0.7
2,172,941	+		Psyr_1898	0.57	-0.3
2,172,941	+		Psyr_1898	0.57	+1.7
2,172,941	+		Psyr_1898	0.57	-2.2
2,172,941	+		Psyr_1898	0.57	+1.1
2,172,941	+		Psyr_1898	0.57	+0.6
2,172,942	-		Psyr_1898	0.57	+0.3
2,172,942	-		Psyr_1898	0.57	-1.7
2,172,942	-		Psyr_1898	0.57	+0.7
2,172,942	-		Psyr_1898	0.57	-0.6
2,172,942	-		Psyr_1898	0.57	-2.3
2,172,942	-		Psyr_1898	0.57	-1.3
2,172,942	-		Psyr_1898	0.57	-1.5
2,172,942	-		Psyr_1898	0.57	+0.7
2,172,942	-				+1.7
2,172,942	-		Psyr_1898	0.57	-3.3
2,172,942	-		Psyr_1898	0.57	-2.6
2,172,942	-		Psyr_1898	0.57	-0.7
2,172,942	-		Psyr_1898	0.57	-0.5
2,172,942	-		Psyr_1898	0.57	-1.2
2,172,942	-		Psyr_1898	0.57	+0.5
2,172,942	-		Psyr_1898	0.57	-2.2
2,172,942	-		Psyr_1898	0.57	-0.3
2,172,942	-		Psyr_1898	0.57	-1.6
2,172,942	-		Psyr_1898	0.57	-2.1
2,172,942	-		Psyr_1898	0.57	+1.1
2,172,942	-		Psyr_1898	0.57	-3.0
2,172,942	-		Psyr_1898	0.57	+1.7
2,172,942	-		Psyr_1898	0.57	-3.0
2,172,985	+		Psyr_1898	0.60	-2.6