Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1789

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
2,039,963	+		Psyr_1788	0.36	+0.4
2,039,963	+		Psyr_1788	0.36	+0.6
2,039,964	-		Psyr_1788	0.36	-1.0
2,039,964	-		Psyr_1788	0.36	+0.2
2,039,964	-		Psyr_1788	0.36	-1.2
2,039,964	-		Psyr_1788	0.36	+1.4
2,040,206	+		Psyr_1788	0.56	-0.3
2,040,206	+		Psyr_1788	0.56	-0.8
2,040,207	-		Psyr_1788	0.57	-0.9
2,040,207	-		Psyr_1788	0.57	+1.6
2,040,207	-		Psyr_1788	0.57	-1.7
2,040,207	-		Psyr_1788	0.57	+0.2
2,040,207	-		Psyr_1788	0.57	+0.2
2,040,207	-		Psyr_1788	0.57	+0.8
2,040,207	-		Psyr_1788	0.57	-0.4
2,040,228	-		Psyr_1788	0.58	-1.1
2,040,228	-		Psyr_1788	0.58	+0.5
2,040,228	-		Psyr_1788	0.58	-0.2
2,040,233	+		Psyr_1788	0.59	+1.1
2,040,234	-		Psyr_1788	0.59	-0.9
2,040,234	-		Psyr_1788	0.59	-0.3
2,040,234	-		Psyr_1788	0.59	-0.2
2,040,234	-		Psyr_1788	0.59	-1.4
2,040,265	+		Psyr_1788	0.61	-0.4
2,040,654	+				+0.8
2,040,737	-				-1.8
2,041,404	-		Psyr_1789	0.37	+1.2
2,041,633	-		Psyr_1789	0.51	+1.3
2,041,966	+		Psyr_1789	0.71	-0.4
2,041,966	+		Psyr_1789	0.71	-0.4
2,041,966	+		Psyr_1789	0.71	+2.4
2,041,967	-		Psyr_1789	0.71	+0.6
2,041,967	-		Psyr_1789	0.71	-1.4
2,041,967	-		Psyr_1789	0.71	-2.5
2,041,967	-		Psyr_1789	0.71	+0.6
2,041,967	-		Psyr_1789	0.71	+0.1
2,042,049	-		Psyr_1789	0.76	+0.8
2,042,161	+		Psyr_1789	0.83	+0.5
2,042,161	+		Psyr_1789	0.83	+2.2
2,042,161	+		Psyr_1789	0.83	-0.7
2,042,162	-		Psyr_1789	0.83	-0.0
2,042,162	-		Psyr_1789	0.83	+0.6
2,042,162	-		Psyr_1789	0.83	-1.9
2,042,162	-		Psyr_1789	0.83	-0.9
2,042,313	+				-0.5
2,042,484	-				+0.6
2,042,546	+				-1.7
2,042,546	+				+0.4
2,042,547	-				+0.1
2,042,547	-				-3.5
2,042,547	-				+0.2
2,042,550	+				+2.8
2,042,550	+				-0.9
2,042,551	-				+0.1
2,042,551	-				-0.1
2,042,551	-				+0.0
2,042,551	-				+3.3
2,042,551	-				-0.3
2,042,551	-				+0.1
2,042,568	+				+0.2
2,042,568	+				+0.4
2,042,568	+				-0.8
2,042,569	-				-0.2
2,042,569	-				-1.6
2,042,569	-				-0.3
2,042,569	-				-0.7
2,042,569	-				-1.5
2,042,569	-				+0.1
2,042,580	-				+0.5
2,042,592	+				+0.3
2,042,593	-				-0.7
2,042,593	-				-1.1
2,042,593	-				-0.3
2,042,601	+				+0.4
2,042,612	-				-1.4
2,042,741	+				-0.3
2,042,984	-		Psyr_1790	0.28	+0.1
2,043,081	+		Psyr_1790	0.37	-1.8
2,043,082	-		Psyr_1790	0.37	+0.3
2,043,082	-		Psyr_1790	0.37	-0.2
2,043,131	+		Psyr_1790	0.42	+0.4
2,043,131	+		Psyr_1790	0.42	+0.1
2,043,131	+		Psyr_1790	0.42	+1.0
2,043,132	-		Psyr_1790	0.42	+3.6
2,043,132	-		Psyr_1790	0.42	-1.2
2,043,203	-		Psyr_1790	0.49	-0.1
2,043,203	-		Psyr_1790	0.49	-2.8
2,043,203	-		Psyr_1790	0.49	+3.1
2,043,203	-		Psyr_1790	0.49	-0.9
2,043,203	-		Psyr_1790	0.49	-1.2
2,043,206	+		Psyr_1790	0.50	+1.5
2,043,206	+		Psyr_1790	0.50	-1.6
2,043,206	+		Psyr_1790	0.50	+0.6
2,043,206	+		Psyr_1790	0.50	+0.2
2,043,206	+		Psyr_1790	0.50	-0.1
2,043,206	+		Psyr_1790	0.50	-0.5
2,043,206	+		Psyr_1790	0.50	-0.9
2,043,206	+		Psyr_1790	0.50	-0.3
2,043,206	+		Psyr_1790	0.50	+0.5
2,043,206	+		Psyr_1790	0.50	-0.9
2,043,206	+		Psyr_1790	0.50	-0.5
2,043,206	+		Psyr_1790	0.50	+1.2
2,043,207	-		Psyr_1790	0.50	+0.8
2,043,207	-		Psyr_1790	0.50	-1.9
2,043,207	-		Psyr_1790	0.50	+0.4
2,043,207	-		Psyr_1790	0.50	-0.4
2,043,207	-		Psyr_1790	0.50	-0.2
2,043,207	-		Psyr_1790	0.50	+0.9
2,043,207	-		Psyr_1790	0.50	+1.0
2,043,207	-		Psyr_1790	0.50	+0.2
2,043,207	-		Psyr_1790	0.50	-0.8
2,043,207	-		Psyr_1790	0.50	+0.6
2,043,207	-		Psyr_1790	0.50	-0.8
2,043,207	-		Psyr_1790	0.50	+0.9
2,043,227	+		Psyr_1790	0.52	+0.6
2,043,228	-		Psyr_1790	0.52	-0.1
2,043,294	-		Psyr_1790	0.59	-0.4
2,043,326	+		Psyr_1790	0.62	-0.4
2,043,326	+		Psyr_1790	0.62	-1.1
2,043,326	+		Psyr_1790	0.62	+0.5
2,043,327	-		Psyr_1790	0.62	-0.1
2,043,327	-		Psyr_1790	0.62	+0.6
2,043,327	-		Psyr_1790	0.62	+0.5
2,043,327	-		Psyr_1790	0.62	-0.7
2,043,327	-		Psyr_1790	0.62	-0.0