Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1659

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
1,861,392	+		Psyr_1657	0.70	-3.0
1,861,392	+		Psyr_1657	0.70	+1.3
1,861,393	-		Psyr_1657	0.70	-2.3
1,861,393	-		Psyr_1657	0.70	-1.0
1,861,395	+		Psyr_1657	0.71	-1.7
1,861,396	-		Psyr_1657	0.71	+0.0
1,861,401	+		Psyr_1657	0.71	-2.6
1,861,423	+		Psyr_1657	0.75	+1.0
1,861,423	+		Psyr_1657	0.75	-1.7
1,861,423	+		Psyr_1657	0.75	+1.1
1,861,423	+		Psyr_1657	0.75	-0.1
1,861,424	-		Psyr_1657	0.75	-0.7
1,861,424	-		Psyr_1657	0.75	-0.1
1,861,443	+		Psyr_1657	0.78	+0.3
1,861,444	-		Psyr_1657	0.78	-1.6
1,861,444	-		Psyr_1657	0.78	+0.8
1,861,444	-		Psyr_1657	0.78	-0.4
1,861,697	+				-0.7
1,861,697	+				+1.0
1,861,711	+				-0.4
1,861,718	+				-1.1
1,861,727	+				+0.5
1,861,842	-		Psyr_1658	0.21	-1.2
1,861,878	+		Psyr_1658	0.27	+0.6
1,861,878	+		Psyr_1658	0.27	+0.8
1,861,879	-		Psyr_1658	0.28	-1.1
1,861,879	-		Psyr_1658	0.28	+0.6
1,861,879	-				-0.7
1,861,879	-		Psyr_1658	0.28	-0.6
1,861,968	+		Psyr_1658	0.42	+0.6
1,861,968	+		Psyr_1658	0.42	+0.9
1,861,968	+		Psyr_1658	0.42	-0.6
1,862,049	+		Psyr_1658	0.56	-0.4
1,862,049	+		Psyr_1658	0.56	-2.6
1,862,050	-		Psyr_1658	0.56	+0.3
1,862,050	-		Psyr_1658	0.56	-0.4
1,862,050	-		Psyr_1658	0.56	-0.2
1,862,050	-		Psyr_1658	0.56	-0.9
1,862,050	-		Psyr_1658	0.56	-0.0
1,862,050	-		Psyr_1658	0.56	+1.4
1,862,050	-		Psyr_1658	0.56	+0.2
1,862,187	+		Psyr_1658	0.79	+0.6
1,862,239	-		Psyr_1658	0.87	-1.0
1,862,291	+				+0.0
1,862,291	+				+0.0
1,862,291	+				-0.4
1,862,292	-				+0.9
1,862,313	+				+0.2
1,862,314	-				+0.9
1,862,320	+				+0.6
1,862,476	+		Psyr_1659	0.24	-1.2
1,862,476	+		Psyr_1659	0.24	+2.7
1,862,479	+		Psyr_1659	0.24	-1.7
1,862,480	-		Psyr_1659	0.24	-3.0
1,862,480	-		Psyr_1659	0.24	-1.2
1,862,554	+		Psyr_1659	0.37	-1.2
1,862,554	+		Psyr_1659	0.37	-1.2
1,862,554	+		Psyr_1659	0.37	-0.9
1,862,555	-		Psyr_1659	0.38	-1.5
1,862,555	-		Psyr_1659	0.38	-1.4
1,862,555	-		Psyr_1659	0.38	-0.4
1,862,675	+		Psyr_1659	0.59	+1.2
1,862,675	+		Psyr_1659	0.59	-0.8
1,862,676	-		Psyr_1659	0.59	-1.4
1,862,676	-		Psyr_1659	0.59	-3.6
1,862,676	-		Psyr_1659	0.59	-2.8
1,862,676	-		Psyr_1659	0.59	+0.7
1,862,676	-		Psyr_1659	0.59	-0.0
1,862,753	-		Psyr_1659	0.73	-0.7
1,862,753	-		Psyr_1659	0.73	+0.9
1,862,803	+		Psyr_1659	0.82	+0.7
1,862,907	+				+0.4
1,862,908	-				-0.4
1,862,908	-				-1.7
1,862,908	-				-0.4
1,862,908	-				-0.4
1,863,092	+		Psyr_1660	0.10	+0.3
1,863,092	+		Psyr_1660	0.10	-0.5
1,863,092	+		Psyr_1660	0.10	-0.9
1,863,092	+		Psyr_1660	0.10	+0.9
1,863,093	-		Psyr_1660	0.10	-1.5
1,863,093	-		Psyr_1660	0.10	-1.0
1,863,184	+		Psyr_1660	0.19	-0.3
1,863,290	-		Psyr_1660	0.30	-0.7
1,863,290	-		Psyr_1660	0.30	+0.8
1,863,290	-		Psyr_1660	0.30	-2.2
1,863,290	-		Psyr_1660	0.30	-1.0
1,863,290	-		Psyr_1660	0.30	-0.1
1,863,290	-		Psyr_1660	0.30	+0.1
1,863,325	-		Psyr_1660	0.33	-1.0
1,863,332	-		Psyr_1660	0.34	-0.9
1,863,705	+		Psyr_1660	0.71	-2.1
1,863,869	+		Psyr_1660	0.87	+1.0
1,863,869	+		Psyr_1660	0.87	-2.6
1,863,869	+		Psyr_1660	0.87	-0.4
1,863,869	+		Psyr_1660	0.87	+0.3
1,863,869	+		Psyr_1660	0.87	-1.6
1,863,870	-		Psyr_1660	0.87	+0.3
1,863,870	-		Psyr_1660	0.87	+1.1
1,863,870	-		Psyr_1660	0.87	+1.9
1,863,870	-		Psyr_1660	0.87	-1.2
1,863,870	-		Psyr_1660	0.87	+1.3
1,863,870	-		Psyr_1660	0.87	-0.6