Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1609

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
1,811,058	-		Psyr_1608	0.84	-2.2
1,811,058	-		Psyr_1608	0.84	+0.2
1,811,111	+		Psyr_1608	0.85	-1.0
1,811,111	+		Psyr_1608	0.85	-0.3
1,811,111	+		Psyr_1608	0.85	-0.2
1,811,111	+		Psyr_1608	0.85	+0.3
1,811,111	+		Psyr_1608	0.85	+0.4
1,811,112	-		Psyr_1608	0.85	-1.2
1,811,112	-		Psyr_1608	0.85	+3.4
1,811,112	-		Psyr_1608	0.85	-1.8
1,811,112	-		Psyr_1608	0.85	-2.4
1,811,112	-		Psyr_1608	0.85	-0.9
1,811,112	-		Psyr_1608	0.85	+0.3
1,811,219	+		Psyr_1608	0.88	-0.1
1,811,220	-		Psyr_1608	0.88	+1.6
1,811,300	-		Psyr_1608	0.90	+0.6
1,811,300	-		Psyr_1608	0.90	-1.1
1,811,345	+				+0.1
1,811,345	+				+1.5
1,811,346	-				+0.3
1,811,394	+				-1.2
1,811,394	+				-1.4
1,811,394	+				-0.9
1,811,412	-				+0.2
1,811,489	+				-0.4
1,811,489	+				+0.1
1,811,490	-				+0.6
1,811,490	-				+0.2
1,811,520	-				-1.0
1,811,595	+				-1.1
1,811,595	+				-0.8
1,811,596	-				+0.1
1,811,644	+				-0.9
1,811,644	+				+0.3
1,811,645	-				-0.5
1,811,645	-				+2.2
1,811,645	-				-1.8
1,811,649	+				+1.0
1,811,652	+				+0.5
1,811,652	+				-0.7
1,811,673	-				+0.0
1,811,713	+				+0.4
1,811,713	+				-0.1
1,811,713	+				-1.4
1,811,714	-				-3.9
1,811,714	-				-1.8
1,811,796	+				-0.1
1,811,796	+				+1.4
1,811,796	+				-1.9
1,811,798	+				-0.3
1,811,799	-				-1.7
1,811,822	-				+0.6
1,811,822	-				+0.0
1,811,827	-				-1.7
1,811,827	-				-3.9
1,811,827	-				-1.3
1,811,827	-				-1.5
1,811,862	+				+0.3
1,811,875	-				-1.5
1,811,994	+				+1.1
1,811,994	+				+1.8
1,811,994	+				+1.7
1,811,995	-				+1.0
1,811,995	-				-0.8
1,811,995	-				+1.0
1,811,995	-				+0.8
1,812,009	-				+1.7
1,812,089	+				+0.7
1,812,089	+				+0.7
1,812,090	-				+0.8
1,812,315	+		Psyr_1609	0.27	+0.8
1,812,315	+		Psyr_1609	0.27	+0.6
1,812,316	-		Psyr_1609	0.27	+1.2
1,812,316	-		Psyr_1609	0.27	+0.3
1,812,316	-		Psyr_1609	0.27	+2.6
1,812,381	+		Psyr_1609	0.32	+0.3
1,812,381	+		Psyr_1609	0.32	+0.2
1,812,382	-		Psyr_1609	0.32	+1.7
1,812,382	-		Psyr_1609	0.32	+0.4
1,812,618	+		Psyr_1609	0.50	+0.6
1,812,619	-		Psyr_1609	0.50	+1.9
1,812,619	-		Psyr_1609	0.50	+1.2
1,812,633	+		Psyr_1609	0.51	+1.8
1,812,937	-		Psyr_1609	0.75	+0.6
1,813,108	-		Psyr_1609	0.88	+1.8
1,813,108	-		Psyr_1609	0.88	+1.9
1,813,125	-		Psyr_1609	0.89	+2.3
1,813,125	-		Psyr_1609	0.89	+2.3
1,813,135	+				-0.3
1,813,136	-				+1.8
1,813,136	-				+1.9
1,813,234	+				+0.6
1,813,234	+				+1.7
1,813,261	+				+2.3
1,813,265	+				+1.8
1,813,265	+				+3.3
1,813,265	+				+1.2
1,813,265	+				+2.2
1,813,265	+				+1.6
1,813,265	+				+1.5
1,813,265	+				-1.1
1,813,266	-				+0.1
1,813,266	-				-0.4
1,813,266	-				+1.0
1,813,266	-				+3.4
1,813,266	-				+0.2
1,813,845	-				-0.7
1,814,078	+		Psyr_1610	0.34	-1.8
1,814,078	+		Psyr_1610	0.34	+0.4
1,814,078	+		Psyr_1610	0.34	-0.1
1,814,078	+		Psyr_1610	0.34	-1.4
1,814,079	-		Psyr_1610	0.34	-1.0
1,814,079	-		Psyr_1610	0.34	-1.6
1,814,079	-		Psyr_1610	0.34	-2.3
1,814,079	-		Psyr_1610	0.34	-1.0
1,814,235	-		Psyr_1610	0.58	+1.1
1,814,235	-		Psyr_1610	0.58	-0.2
1,814,235	-		Psyr_1610	0.58	+0.4