Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1389

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
1,569,906	+				-1.6
1,569,906	+				+0.5
1,569,907	-				+2.3
1,569,907	-				-0.1
1,569,907	-				-1.1
1,570,090	+		Psyr_1388	0.12	+0.3
1,570,300	+		Psyr_1388	0.43	-2.5
1,570,300	+		Psyr_1388	0.43	-0.3
1,570,300	+		Psyr_1388	0.43	+0.3
1,570,300	+		Psyr_1388	0.43	-0.7
1,570,300	+		Psyr_1388	0.43	+1.7
1,570,300	+		Psyr_1388	0.43	+1.4
1,570,301	-		Psyr_1388	0.43	-0.2
1,570,301	-		Psyr_1388	0.43	-0.1
1,570,301	-		Psyr_1388	0.43	+0.3
1,570,301	-		Psyr_1388	0.43	+1.4
1,570,301	-		Psyr_1388	0.43	+1.2
1,570,690	+				-0.3
1,570,690	+				-0.2
1,570,690	+				+0.6
1,570,690	+				-0.8
1,570,690	+				-2.9
1,570,690	+				+0.7
1,570,691	-				-0.2
1,570,691	-				-1.4
1,570,691	-				-0.1
1,570,691	-				+0.6
1,570,691	-				+0.9
1,570,691	-				+0.7
1,570,691	-				-0.6
1,570,775	+		Psyr_1389	0.15	+0.0
1,570,909	-		Psyr_1389	0.44	-2.0
1,570,974	-		Psyr_1389	0.58	+0.3
1,570,974	-		Psyr_1389	0.58	-3.4
1,570,974	-		Psyr_1389	0.58	-0.5
1,570,974	-		Psyr_1389	0.58	-1.0
1,570,974	-		Psyr_1389	0.58	-1.4
1,571,024	+		Psyr_1389	0.68	-0.9
1,571,024	+		Psyr_1389	0.68	+0.6
1,571,135	+				-0.3
1,571,135	+				+1.3
1,571,136	-				-1.1
1,571,136	-				-1.2
1,571,136	-				+0.2
1,571,152	+				-0.1
1,571,152	+				+0.0
1,571,152	+				-1.0
1,571,152	+				+0.4
1,571,152	+				+0.3
1,571,152	+				+1.3
1,571,153	-				+0.4
1,571,153	-				-1.0
1,571,153	-				-1.0
1,571,186	+				+1.0
1,571,186	+				-1.1
1,571,186	+				+0.6
1,571,186	+				+0.5
1,571,187	-				-0.7
1,571,226	+				-1.0
1,571,227	-				-0.4
1,571,227	-				-1.4
1,571,227	-				+0.1
1,571,229	+				-2.4
1,571,229	+				+2.6
1,571,230	-				-1.9
1,571,274	+				+0.2
1,571,275	-				+0.8
1,571,275	-				+1.4
1,571,466	+		Psyr_1390	0.31	+2.1
1,571,466	+		Psyr_1390	0.31	-1.8
1,571,466	+		Psyr_1390	0.31	-0.2
1,571,466	+		Psyr_1390	0.31	-0.7
1,571,466	+		Psyr_1390	0.31	-0.8
1,571,467	-		Psyr_1390	0.31	-2.0
1,571,467	-		Psyr_1390	0.31	-0.4
1,571,467	-		Psyr_1390	0.31	-0.1
1,571,532	+		Psyr_1390	0.40	-1.8
1,571,532	+		Psyr_1390	0.40	-2.6
1,571,532	+		Psyr_1390	0.40	-0.1
1,571,532	+		Psyr_1390	0.40	-1.0
1,571,533	-		Psyr_1390	0.40	-0.0
1,571,533	-		Psyr_1390	0.40	-0.4
1,571,533	-		Psyr_1390	0.40	-0.6
1,571,533	-		Psyr_1390	0.40	+0.3
1,571,679	+		Psyr_1390	0.60	+0.8
1,571,680	-		Psyr_1390	0.61	+1.8
1,571,680	-		Psyr_1390	0.61	-0.7
1,571,691	-		Psyr_1390	0.62	-0.4
1,571,978	+				+0.2
1,571,978	+				+0.8
1,571,998	-				-0.7