Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1007

Experiment: KB with Novobiocin 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 250 ug/ml
1,140,828	+		Psyr_1006	0.51	-0.8
1,140,829	-		Psyr_1006	0.52	-0.3
1,140,829	-		Psyr_1006	0.52	+0.4
1,140,829	-		Psyr_1006	0.52	-1.9
1,140,937	+		Psyr_1006	0.63	+0.1
1,140,937	+		Psyr_1006	0.63	-0.6
1,140,937	+		Psyr_1006	0.63	-0.9
1,140,938	-		Psyr_1006	0.64	+0.2
1,140,938	-		Psyr_1006	0.64	-1.2
1,140,954	+		Psyr_1006	0.65	-1.1
1,140,954	+		Psyr_1006	0.65	-2.4
1,140,954	+		Psyr_1006	0.65	-1.5
1,140,955	-		Psyr_1006	0.65	-0.3
1,140,955	-		Psyr_1006	0.65	+0.8
1,140,955	-		Psyr_1006	0.65	+0.5
1,141,005	+		Psyr_1006	0.71	-0.3
1,141,005	+		Psyr_1006	0.71	+0.4
1,141,005	+		Psyr_1006	0.71	-1.7
1,141,006	-		Psyr_1006	0.71	-1.0
1,141,330	-				+2.2
1,141,330	-				-3.1
1,141,352	+				+0.9
1,141,353	-				+1.2
1,141,375	-				+1.5
1,141,375	-				+0.4
1,141,375	-				+0.8
1,141,375	-				+0.7
1,141,485	+				-0.3
1,141,485	+				+0.1
1,141,485	+				-0.7
1,141,485	+				+1.0
1,141,485	+				-1.2
1,141,485	+				+1.3
1,141,485	+				+0.2
1,141,485	+				+0.4
1,141,485	+				-0.9
1,141,485	+				+1.2
1,141,485	+				+0.3
1,141,485	+				-1.2
1,141,485	+				+0.5
1,141,486	-				+0.0
1,141,486	-				-0.6
1,141,486	-				-2.6
1,141,486	-				-0.2
1,141,486	-				+1.1
1,141,486	-				-0.1
1,141,493	-				+1.7
1,141,596	+		Psyr_1007	0.13	+0.7
1,141,597	-		Psyr_1007	0.13	+0.5
1,141,597	-		Psyr_1007	0.13	+1.7
1,141,619	+		Psyr_1007	0.14	+0.2
1,141,620	-		Psyr_1007	0.14	+1.1
1,141,620	-		Psyr_1007	0.14	+0.7
1,141,620	-		Psyr_1007	0.14	-1.0
1,141,620	-		Psyr_1007	0.14	-0.6
1,141,704	+		Psyr_1007	0.18	-1.4
1,141,705	-		Psyr_1007	0.18	+0.0
1,141,821	+		Psyr_1007	0.23	+1.7
1,141,822	-		Psyr_1007	0.23	-1.2
1,141,822	-		Psyr_1007	0.23	-0.1
1,141,822	-		Psyr_1007	0.23	+0.8
1,142,074	-		Psyr_1007	0.36	-0.6
1,142,074	-		Psyr_1007	0.36	+1.9
1,142,074	-		Psyr_1007	0.36	+1.1
1,142,463	+		Psyr_1007	0.54	+0.7
1,142,463	+		Psyr_1007	0.54	-0.6
1,142,463	+		Psyr_1007	0.54	+0.4
1,142,464	-		Psyr_1007	0.54	-0.6
1,142,579	+		Psyr_1007	0.60	-0.2
1,142,727	+		Psyr_1007	0.67	-1.8
1,142,728	-		Psyr_1007	0.67	-0.1
1,142,728	-		Psyr_1007	0.67	-1.2
1,142,728	-		Psyr_1007	0.67	+1.6
1,142,728	-		Psyr_1007	0.67	-1.0
1,143,075	+		Psyr_1007	0.83	-0.6
1,143,075	+		Psyr_1007	0.83	+0.3
1,143,076	-		Psyr_1007	0.83	+1.3
1,143,076	-		Psyr_1007	0.83	+0.3
1,143,076	-		Psyr_1007	0.83	-0.1
1,143,076	-		Psyr_1007	0.83	+0.3
1,143,076	-		Psyr_1007	0.83	-1.3
1,143,323	+				+0.5
1,143,323	+				+0.4
1,143,461	+				+0.0
1,143,461	+				+1.3
1,143,461	+				-1.2
1,143,462	-				-0.8
1,143,462	-				-1.8
1,143,462	-				-1.6
1,143,462	-				+1.8
1,143,462	-				+0.6
1,143,462	-				+0.1
1,143,462	-				+0.5
1,143,525	+		Psyr_1008	0.11	-0.3
1,143,525	+		Psyr_1008	0.11	-0.5
1,143,667	+		Psyr_1008	0.74	+0.1
1,143,775	+				+0.1
1,143,799	-				-0.7
1,143,799	-				+0.1
1,143,855	+				-0.5
1,143,855	+				+0.5
1,143,855	+				+0.0
1,143,855	+				+0.9
1,143,856	-				-2.6
1,143,856	-				-1.3
1,143,856	-				-1.5
1,143,856	-				+0.1
1,143,856	-				-1.0
1,143,856	-				+0.5
1,143,858	-				+0.2
1,143,919	-		Psyr_1009	0.21	-0.8
1,143,979	+		Psyr_1009	0.33	-0.6
1,143,979	+		Psyr_1009	0.33	-0.3
1,144,029	+		Psyr_1009	0.43	+0.5
1,144,315	+				+0.2
1,144,316	-				-0.5
1,144,402	+				+0.5
1,144,403	-				-0.9
1,144,403	-				+0.8