Experiment: KB with Novobiocin 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0519 and Psyr_0520 are separated by 129 nucleotides Psyr_0520 and Psyr_0521 are separated by 2 nucleotides
Psyr_0519: Psyr_0519 - Glutamate-ammonia-ligase adenylyltransferase, at 579,311 to 582,268
_0519
Psyr_0520: Psyr_0520 - Glycosyl transferase, family 9, at 582,398 to 583,432
_0520
Psyr_0521: Psyr_0521 - Glycosyl transferase, family 9, at 583,435 to 584,499
_0521
Position (kb) 582
583
584 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 581.456 kb on + strand, within Psyr_0519 at 581.639 kb on + strand, within Psyr_0519 at 581.639 kb on + strand, within Psyr_0519 at 581.640 kb on - strand, within Psyr_0519 at 582.011 kb on + strand at 582.056 kb on + strand at 582.056 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.142 kb on + strand at 582.142 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.306 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 250 ug/ml remove 581,456 + Psyr_0519 0.73 +0.1 581,639 + Psyr_0519 0.79 -0.3 581,639 + Psyr_0519 0.79 -2.8 581,640 - Psyr_0519 0.79 -0.6 582,011 + -1.9 582,056 + -1.4 582,056 + -0.5 582,140 + -0.1 582,140 + -0.1 582,140 + +0.4 582,140 + +0.1 582,140 + -1.2 582,140 + -0.1 582,140 + -1.7 582,140 + +1.7 582,140 + -0.9 582,142 + -1.4 582,142 + -0.4 582,304 + -0.5 582,304 + +0.3 582,304 + +1.2 582,304 + -0.6 582,304 + +0.3 582,304 + -1.9 582,304 + +0.1 582,304 + -0.5 582,304 + -0.6 582,306 + -1.4 582,312 + -1.6 582,312 + +0.4 582,312 + -0.4 582,312 + +0.4 582,312 + -0.2 582,312 + -0.0
Or see this region's nucleotide sequence