Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16695

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
3,820,226	-		HSERO_RS16690	0.36	+0.3
3,820,535	+		HSERO_RS16690	0.57	+0.2
3,821,202	-				+1.8
3,821,218	+				-0.2
3,821,226	-				-1.5
3,821,233	+				+0.0
3,821,233	+				+0.2
3,821,285	-		HSERO_RS16695	0.17	+1.3
3,821,342	+		HSERO_RS16695	0.28	+0.1
3,821,457	-		HSERO_RS16695	0.50	+1.4
3,821,475	+		HSERO_RS16695	0.53	-0.0
3,821,505	+		HSERO_RS16695	0.59	-0.0
3,821,753	+				-1.4
3,821,827	+				-0.1
3,821,834	+				-0.6
3,821,842	-				-0.1
3,822,148	-		HSERO_RS16700	0.35	+0.6
3,822,192	-		HSERO_RS16700	0.39	+0.8
3,822,272	-		HSERO_RS16700	0.48	+0.0
3,822,310	+		HSERO_RS16700	0.52	-0.1
3,822,337	-		HSERO_RS16700	0.54	+0.2
3,822,469	+		HSERO_RS16700	0.68	-0.6
3,822,482	-				-1.5