Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006009

Experiment: RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM
2,327,856	-				-2.8
2,328,260	-		ABIE53_006007	0.63	-0.8
2,328,620	-		ABIE53_006008	0.39	-0.5
2,328,717	+		ABIE53_006008	0.65	-1.0
2,328,795	-		ABIE53_006008	0.86	-1.5
2,328,844	+				+1.9
2,328,845	-				-1.5
2,328,845	-				-2.3
2,328,845	-				+1.1
2,328,851	-				+0.2
2,329,039	-		ABIE53_006009	0.13	-0.0
2,329,039	-		ABIE53_006009	0.13	-1.0
2,329,088	-		ABIE53_006009	0.17	+2.5
2,329,088	-		ABIE53_006009	0.17	-1.0
2,329,245	+		ABIE53_006009	0.28	+1.5
2,329,354	-		ABIE53_006009	0.35	+0.8
2,329,645	-		ABIE53_006009	0.56	-0.8
2,329,657	+		ABIE53_006009	0.57	-0.0
2,329,658	-		ABIE53_006009	0.57	-0.4
2,329,796	-		ABIE53_006009	0.67	-0.3
2,330,044	-		ABIE53_006009	0.84	+0.5
2,330,198	+				-0.3
2,330,199	-				-0.5
2,330,245	+				-0.2
2,330,245	+				-0.2
2,330,245	+				-2.0
2,330,246	-				+1.1
2,330,341	+				+2.5
2,330,342	-				-1.5
2,330,342	-				-1.0
2,330,453	+				+0.5
2,330,454	-				-0.3
2,330,880	-		ABIE53_006010	0.27	+0.2
2,330,880	-		ABIE53_006010	0.27	+0.5
2,331,005	-		ABIE53_006010	0.38	-0.3
2,331,005	-		ABIE53_006010	0.38	-0.5